Magallana gigas (Pacific oyster): 105330258
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Entry
105330258 CDS
T03920
Name
(RefSeq) GRB10-interacting GYF protein 2 isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crg03019
]
105330258
Messenger RNA biogenesis [BR:
crg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
105330258
Surveillance factors
Other surveillance factors
105330258
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
GYF_2
Motif
Other DBs
NCBI-GeneID:
105330258
NCBI-ProteinID:
XP_019923644
LinkDB
All DBs
Position
3:complement(7444740..7458995)
Genome browser
AA seq
1284 aa
AA seq
DB search
MADTLKFGPEWLRALSDGNNVGTPPPSPGFGKYKLAEHRYGREEMLALFNPDTDPPEEIK
KLTPVYVDKKQEPLALVALSEEEQRILSQSVNSVAVLRMFGRGGPPGIRGARGGGPDRGR
GRGRGRGEYIQRGISYEETGGGFGRPPTHNRNDGWEEVGAKRNYNTNRYDDGSGGPPKRE
FNRSLSSENWRDRGGNEEEEEDGDWRRAGGSKWNARGSWRDPATRGGFDPDRRQNGIHRG
GFDRGGRQYQRSRNSESWDDEEILPEWSMPDSDDVEELGTFDSSGAFVSTKPEDLNNKDN
HTKEESPGKPPSPVAQTSVKEESKQDSKNKAIPKQPNANEDKAPPSKKQDKVAENKTVIN
NNKAEPPQGKPKKEEAPKTKKDKSSQQNSAQSSSGEVKKESATQDRGSTQGAKKETKTEK
EKPRDHSAPPVKKGTTVSEVEKEALDRLQESAENMVLAAMTAEEEEREMRSGPPPPAALP
QPSPSVAVPLDHENAQKWFYRDPQGDTQGPFASNEMAEWFSAGYFTMDLYVRRGCDDKFS
PLGELIKRWGRVPFLPGPSAPPLLNVPPTSQPNLEQMQQLQQHQEQLKALHAQYLLQQQA
MQQQLLRQIQMQQIQQIMQHMQENEQYKNLSPAQQKQIAMQLLLKQPPQPVMMPMQQPSK
LSPRSPPSEAAPMNDHPPTSSSHPSFHRSMSQPSDLQAEDGSIWGVAQSVPMAQPVPPGG
NPPSVWDVIPHSRSTPDNELERARKEKEELEMRKKHEEEMKRKQEEFLKQQQEELRQQQL
EIQREKEEMERKREALERETALQLQKLEEARRKEEEVRRRKEEEDRMKQQREEEMRKQRQ
EEQKKREEEMRQRELKRQEDLQRQQQEMLRQQEQRKREMEEMENQKQLELQRRQEQQRQQ
QEALKKLQQEQLANIQLPSHAQWGSQPVTQTSQKTRSLLEIQEQEERERREKEEIQRRLE
NERQQMLAIQQQQQQQKSWSSQILRETVRFPTQQQNMKTLLEIQEEQRKLEEEKQRKQQQ
TQAKQNISLAAASAWGGGQPTSSSHWASEGAWGNATRQASTGSSSASNGAGSLGFWDDAI
ISSKRAPKPSNQGGVTTEFPTLKGQPQQKAPPASTTQTNKAKPSKRGKEEEAVQRLFQGS
APPDDTFSQWCDKALKALNTSVDIPTFVAFLKEVESPYEVHDYVRVYVGESKGAQDFAKQ
FLEKRSQSRNKARQTVEDSIWGPAPARDFRQSGGNQHSESDSQKAKGKKKKKMQKIDSSI
LGFTCAADPDRINVGEIEADGTTK
NT seq
3855 nt
NT seq
+upstream
nt +downstream
nt
atggcagacacactaaagttcggtccagagtggcttcgtgccttatcagatggaaacaat
gttgggacacctcctccttccccagggtttgggaaatacaaactggcagaacatcgttac
ggtcgggaagagatgttagccttgttcaatcctgacacagaccctccagaagaaatcaag
aaacttacaccagtatatgttgacaaaaaacaagaacctctagcattagtcgcactatct
gaagaggaacagaggattttgtcccagtctgttaacagtgtggcagtattaagaatgttt
gggcgtggtgggcccccagggatcagaggagccaggggaggaggaccagacagggggaga
ggcagaggtagaggtcgtggggaatacatacagagggggatatcttatgaggagacaggc
ggggggtttggtcgtcctccaacccacaacagaaatgacggatgggaagaagttggtgca
aagagaaattacaacacaaatcgttatgatgatggttcaggtggcccccctaaacgtgag
tttaatagatccctcagcagtgagaactggagagaccggggcggaaacgaggaggaggag
gaggacggggactggaggcgagcagggggatctaagtggaatgcaagagggagttggagg
gatccagcaacgagaggaggttttgacccagatagacgacagaatggaattcataggggt
gggtttgacaggggtgggcgtcagtatcagaggtcacgcaacagtgaatcttgggatgat
gaggaaattttgccagagtggagcatgcctgattcagatgatgttgaagagctcggcacg
tttgattcaagtggagcttttgtttcaacaaagcccgaagatctaaataacaaggacaat
cacacaaaggaggagagtccagggaaacccccgtcacctgttgctcagacttcagtcaag
gaggaatccaagcaagactccaaaaataaagcaattccaaagcaacctaacgctaatgag
gacaaagctccgccctctaaaaaacaggacaaagtggctgaaaacaaaactgtgatcaat
aacaataaagctgagcccccgcagggcaaaccaaagaaagaggaagccccaaaaacaaaa
aaggacaaaagttctcagcagaatagtgctcaaagttccagtggtgaggtcaagaaagaa
agtgctactcaagatagaggttctacacaaggtgccaaaaaagagacaaagactgagaaa
gagaaacctagggaccactcggcaccaccggtgaagaaagggaccactgtgtctgaagtg
gagaaggaggccttagatcgccttcaggaaagtgcagagaatatggtgctagctgccatg
acagcagaggaggaagaaagagagatgaggagtggtcccccaccccccgctgcactaccc
cagccctctcccagtgtagcagtacctctcgatcacgaaaatgcacaaaaatggttttat
agagacccccaaggggatacacaaggtccatttgcatccaatgaaatggctgaatggttt
agtgctggatattttaccatggatctctatgttaggcggggatgtgacgacaaattttcc
ccattaggagagctgataaagcgctgggggcgtgttccttttctaccaggaccctctgca
cccccgctattgaatgtcccaccgaccagccagccaaacttggagcagatgcaacaatta
cagcaacaccaagaacaactgaaggctctgcatgcacagtatctcctccagcaacaagcc
atgcagcagcagttgcttagacaaattcagatgcaacagattcaacagatcatgcaacat
atgcaggaaaatgaacagtataaaaatctgagccctgcccagcagaaacagatcgccatg
cagttactgctgaagcaacctcctcagccagtgatgatgcccatgcagcaaccctccaaa
ctctcaccaaggtccccaccatcagaggcagcccccatgaacgaccatccccccacatca
tctagtcacccctcattccatcgctccatgtctcaacccagtgatttacaggcggaggac
gggtcaatctggggggtcgcccagtcagtacccatggctcagccagtacctccaggtggg
aatccccctagtgtgtgggatgtgatcccacattcccggtcaactccagacaatgagcta
gaacgagccagaaaggaaaaggaagaacttgagatgagaaagaaacatgaagaggagatg
aaacgcaaacaggaggagttccttaagcaacaacaggaggagcttcgtcagcaacagcta
gaaatccagagagagaaagaagagatggagagaaagagggaggcactggagagagaaaca
gccctccaactacagaaacttgaagaggccagaagaaaggaagaggaagtcagaaggaga
aaagaggaagaggacagaatgaaacagcagagggaagaggagatgaggaagcagagacag
gaagagcagaagaagagggaggaggagatgagacaaagagagttaaagagacaagaagac
ttacagagacaacaacaggagatgttacgacaacaggagcagagaaagcgagagatggag
gagatggagaatcagaaacaactggagttacagcgacgccaggaacaacaaagacaacaa
caggaggccctcaaaaagctccagcaggaacaactggccaacatccagttaccctctcac
gcccagtgggggagtcagccggtgacccagacgtctcagaaaaccaggtcactgctggag
attcaggagcaagaggaaagggagaggagagagaaggaggagatacagagaagacttgag
aatgaacgacaacagatgctagccattcaacaacagcagcaacaacagaagtcgtggtcc
agccagattttgcgcgagaccgtcagatttccaacacaacaacaaaatatgaagacgtta
cttgaaatccaggaagaacaacgaaaactggaggaagagaaacaacgaaaacaacagcaa
actcaggccaagcaaaatataagcttagcagctgccagtgcttgggggggaggtcagcca
acttcatcctcccactgggccagtgagggggcctgggggaacgccacccgccaagcctcc
acggggagcagcagtgccagcaatggagcagggtccctgggcttctgggacgatgccatt
atatcctcaaaacgagcacctaaaccaagtaatcagggaggagtgactactgagtttccc
accttaaagggacagcctcagcagaaagcccctcctgcatccactacacagacaaacaaa
gcaaagccctccaagagaggcaaagaagaggaagcggtccagagacttttccagggcagt
gctcccccggacgacacgttctctcagtggtgtgacaaggcactgaaggccctcaacaca
tcagtagacattcctacttttgtggcatttttaaaagaagttgaatccccatacgaagta
cacgattatgtgcgggtgtatgtgggggagtctaagggagcacaagactttgccaaacaa
ttcctggagaaaagaagccagagtcgcaacaaagcacggcaaacagtcgaggacagtatt
tggggccctgcccctgcccgcgatttccgtcagtccggcgggaatcagcatagtgagtca
gactcgcagaaagccaagggaaagaagaaaaagaagatgcagaaaatcgacagcagtatt
cttggatttacatgtgctgctgatccagaccgcatcaacgttggagaaattgaagctgat
ggcacaacaaagtga
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