KEGG   Magallana gigas (Pacific oyster): 105330308
Entry
105330308         CDS       T03920                                 
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC1
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
crg  Magallana gigas (Pacific oyster)
Pathway
crg03020  RNA polymerase
crg03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:crg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    105330308
  09124 Replication and repair
   03420 Nucleotide excision repair
    105330308
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:crg03021]
    105330308
   03400 DNA repair and recombination proteins [BR:crg03400]
    105330308
Transcription machinery [BR:crg03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     105330308
  RNA polymerase III system
   RNA polymerase III
     105330308
  RNA polymerase I system
   RNA polymerase I
     105330308
DNA repair and recombination proteins [BR:crg03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      105330308
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N NA-iREase1 EIAV_Rev Mrr_cat
Other DBs
NCBI-GeneID: 105330308
NCBI-ProteinID: XP_011430230
UniProt: K1Q9K2
LinkDB
Position
7:complement(24484105..24489868)
AA seq 210 aa
MDDEQETYKLWRIRKTIMQLCHDRGYLVTQDELDQTLEEFKGQFGDKPSERKPSRSDLIV
LVAHNDDPTDQMFVFFPEEPNVGIKTIKTYCQRMQEENITRAIIVVQNRMTPSAKQSLTD
MAPKYILEQFLEAELLINITEHMLVPEHVVMTPEEKTELLSRYKLKESQLPRIQQGDPVA
RYFGLKRGQVVKIIRNSETAGRYVSYRLVV
NT seq 633 nt   +upstreamnt  +downstreamnt
atggatgacgaacaagaaacatacaaattatggcgtatacgaaaaactattatgcagctc
tgtcatgaccgaggatacttggtcacacaggatgagttggatcaaactttagaagaattc
aagggccagtttggggacaagccaagtgaaagaaagccttctagaagtgatcttattgtg
ttggttgcccataatgacgacccaacagatcagatgtttgtgttttttcctgaggagcca
aatgttggaataaaaaccataaagacatactgtcagaggatgcaggaggagaacatcaca
cgggcaatcattgtggtccagaaccgaatgaccccctcagccaaacagtccctcactgac
atggcacctaagtacatactggaacaattcctggaggctgaactgctcatcaacatcact
gaacacatgcttgttcctgagcacgtggtgatgactccagaggagaaaacagaactgttg
tctcgatacaaactgaaggaatcacagctgccccgtatacagcaaggagatcccgttgcc
cgatactttggtttaaagagaggacaggtggtaaagattatcagaaactctgaaactgca
ggaagatacgtgagctatcgattggttgtgtga

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