Magallana gigas (Pacific oyster): 105330479
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Entry
105330479 CDS
T03920
Name
(RefSeq) propionyl-CoA carboxylase alpha chain, mitochondrial
KO
K01965
propionyl-CoA carboxylase alpha subunit [EC:
6.4.1.3
]
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg00280
Valine, leucine and isoleucine degradation
crg00630
Glyoxylate and dicarboxylate metabolism
crg00640
Propanoate metabolism
crg01100
Metabolic pathways
crg01200
Carbon metabolism
Module
crg_M00741
Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
105330479
00640 Propanoate metabolism
105330479
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
105330479
Enzymes [BR:
crg01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.3 propionyl-CoA carboxylase
105330479
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
PCC_BT
Biotin_lipoyl
Dala_Dala_lig_C
Biotin_lipoyl_2
ATP-grasp
RimK
ATPgrasp_ST
ATP-grasp_5
HlyD_3
RnfC_N
Motif
Other DBs
NCBI-GeneID:
105330479
NCBI-ProteinID:
XP_034327388
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All DBs
Position
8:13463580..13480892
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AA seq
721 aa
AA seq
DB search
MAATVLRLRGPLRFCSAQGVRSACQPAEYKRCIYTTAPKLKNLYWNDKYNEGEEVFEKIL
IANRGEIACRVIHSCKRLGIKTVAVHSEADSLSLHTRLADEAICVGPAPTNQSYLNMDAI
LKAVKDTGAQAVHPGYGFLSENTVFAAKLADIGVEFIGPSSNSIKAMGDKIESKRIASKA
KVNMIPGHDGVVEDADHCVKLANEIGYPVMIKASAGGGGKGMRIAWDDKEARDSYRLSKQ
EAASSFGDDRMLIEKYIDNPRHIEMQVLCDKHGNALWLNERECSIQRRNQKVIEEAPSTF
VDPDMRRRMGEQATALAKQVQYSSAGTVEFLVDSQKNFYFLEMNTRLQVEHPITECITGI
DIVHQMIRSAKGHKLLYSQSDIPIDGWSFECRVYAEDPYKSFGMPSIGRLEKYIEPSHID
QVRCDSGIQEGSEISVYYDPMICKLVTYGSNRQEALDVMVKALDSYVIKGVTHNIPLLRD
IVTEERFVAGNISTNYLPTVYPDGFKGRMLSASESVDLVAMAAVMYIKDKLVSRSFKNQS
RIPLSLNQPKSWSLSVSLNEENYPLQVSLAGDEVVVESQDQKMNIPFDLDTSSPLINMKI
NGQNKLFQLSKRIGAGLYKLRFFGTVYEVRVLEQFAREMSKLMPVKQEVDMSSLILAPMP
GVLKSVAVKPGDMVAEGQEVCILEAMKMQNSMTSARVAKVKKVNFQQGQTVDEGDVIVEF
E
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgacggtgttaagactccggggacctctacgattttgcagtgcacagggagta
agatcggcatgtcagcctgcagaatataaaagatgtatttatacaactgctccaaagctg
aaaaatctgtattggaatgacaaatacaatgagggagaagaagtgtttgaaaagatcctt
attgccaatcgtggagagattgcgtgccgggttatccacagttgtaaacgtcttggtatt
aaaacggtggcagtccacagtgaggccgattcattgtcacttcatactcgcctggcagat
gaagcgatatgtgtcggtcctgctccaaccaaccagagttatctcaacatggacgctatt
cttaaggctgtcaaggatactggggcccaggcagtgcatcccggttatggtttcttgtca
gaaaatacagtttttgctgctaaattggcagacataggggtggagtttatagggcccagt
agcaactccatcaaggccatgggggacaagatcgagagtaaacgaatcgccagtaaggcc
aaggtcaacatgatccctggacatgatggagtcgtagaagatgcagatcactgtgtcaag
ctggccaacgagattggataccctgtcatgatcaaggcttctgcaggtggtggtgggaag
ggaatgaggattgcgtgggatgacaaggaggctagggattcttaccgcttgtccaaacag
gaggcagcgtccagctttggagatgacagaatgttgattgagaagtacattgacaatccc
agacacattgaaatgcaggtactgtgtgataaacatggaaatgctctgtggttgaatgaa
agagaatgctcaattcagaggagaaaccagaaagtgattgaagaggccccaagcacgttt
gtggaccctgacatgaggaggaggatgggggagcaggccacagccctcgccaaacaagtc
cagtactcctcagcaggtactgtggagttcctggtagattctcagaagaatttttatttc
ctggagatgaacacacgtttacaggtggaacaccccatcactgagtgtatcactggcatt
gacatagtccatcagatgatccgctcagctaaaggtcataaactgctttattctcaatcc
gacattccaatcgatggatggtcctttgaatgcagagtgtatgcagaggatccttacaaa
agttttggaatgccttctattggaagactcgagaaatatattgagccatctcacattgac
caagtacgatgtgacagtggaattcaagaaggcagcgagatcagtgtgtactatgaccca
atgatatgcaagttggttacatatggcagtaacagacaagaagcactggatgtcatggtc
aaagccctggactcctatgtcattaaaggtgtcactcacaacattccgttactgagggac
attgtgacggaggagaggtttgtggcagggaacatcagtaccaattatctccctactgtc
taccctgatgggttcaaaggtcggatgttgtctgcttcagagagtgttgacctggttgct
atggcagcagtgatgtatataaaagataaacttgtctcaagaagttttaaaaatcaatca
agaatacctctctcactcaatcaacctaagagctggtctctgagtgtttctctgaatgaa
gaaaactacccccttcaagtcagcttagctggagatgaagttgttgtggaatctcaagac
cagaaaatgaatattccttttgacctggacacctcctccccactcatcaatatgaaaatt
aacggtcaaaacaaactcttccagctgtcaaaaagaattggagcaggcctgtacaaactg
agattctttggaacagtgtacgaggtgagggtgctggaacagtttgccagggagatgtcc
aaacttatgcctgtcaaacaggaagtggacatgtcctccctgatcctcgcccccatgcct
ggagtcctcaagtcggtggctgtcaaaccaggggacatggtggccgaaggacaagaggtc
tgtatcctggaagcaatgaagatgcagaacagcatgacctccgcacgggtcgctaaagta
aagaaagtcaactttcaacaaggccagacagtggatgagggggatgtgattgtagagttt
gagtga
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