Magallana gigas (Pacific oyster): 105330577
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Entry
105330577 CDS
T03920
Name
(RefSeq) exosome complex component MTR3
KO
K12587
exosome complex component MTR3
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105330577
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crg03019
]
105330577
Messenger RNA biogenesis [BR:
crg03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
105330577
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
Motif
Other DBs
NCBI-GeneID:
105330577
NCBI-ProteinID:
XP_011430637
UniProt:
A0A8W8NDG1
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Position
5:19081539..19086860
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AA seq
273 aa
AA seq
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MPTDSRRINGPEDSFDPSVLLVDKKTREKILRDGKRKDGRKPEQVRPIFLKAGIISQARG
SAYIEQNETKVMCAVYGPREVTKKEEFSMKGQLTCEFKFATFSCRVRRQYQQDNEERDYS
CQLQDALEPAVRMDKFPKAQVNVYVTVLQNDGSPLAASLTCASVALANAGIEMYDLVVGC
SARITPSEVFIDPTESEDYKAENDNEAGNGSVTLGLMPSLNQVSAITSKGEVEFELLNKG
TKQCVDVCQKLYPVLQQAVAKAVEDRLSSDHVT
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgccaacagactcaaggcgaattaatggtccagaggattcatttgatccatcagtttta
cttgtagataaaaagacgagagagaaaattcttcgagatggaaaaagaaaagacggaaga
aaaccagaacaagtcagacctatatttctaaaggctgggatcataagtcaggcccgagga
tcagcctacattgaacagaatgagacaaaagttatgtgcgctgtatatggaccaagagaa
gtaacaaagaaggaggaattcagcatgaagggtcagctgacctgtgagtttaagttcgcg
accttctcatgtcgagttcgtcgccagtatcaacaggacaatgaggagagagattacagc
tgtcagttacaggatgccctggaacccgctgtccgtatggataaattccccaaagctcaa
gtgaatgtatatgtgactgtgttacaaaatgacggctcccctttagcagcctctttgacc
tgtgcctcagtggctctggctaatgcagggatagagatgtatgacctggtggtgggatgc
tcagctagaattactccctctgaagtgttcatagaccccacagaatcagaagattacaaa
gcagagaatgacaatgaggcggggaatggcagcgtgaccctggggctgatgccgtccctc
aatcaggtgtcggccatcacctccaagggcgaagtggaatttgaattactgaataagggc
accaaacaatgtgttgatgtttgtcagaaactgtacccagttctccagcaggcagtggct
aaagcagtggaggataggttgtcaagtgatcatgtgacgtga
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