Magallana gigas (Pacific oyster): 105330720
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Entry
105330720 CDS
T03920
Name
(RefSeq) zinc finger CCCH domain-containing protein 13 isoform X1
KO
K22909
zinc finger CCCH domain-containing protein 13
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crg03019
]
105330720
Messenger RNA biogenesis [BR:
crg03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
105330720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_DUS3L
zf-CCCH_4
zf-CCCH_PAN3
zf-CCCH_12
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
105330720
NCBI-ProteinID:
XP_034328838
LinkDB
All DBs
Position
8:43334143..43354767
Genome browser
AA seq
1619 aa
AA seq
DB search
MSKIKRRVTVDSAKSVPDEGDRRKPSVFERLGPGARKQLDDRGESSYNTKCRRWLISGEC
NFGNSCKFQHGPPYKKARGEDNPDKSRARPKHFKKEIKASDSDSDQRSRSKVKKEKIRSI
VSKKAAAPDSDSDSSEDSWEQERPPSDRPDLDFKKELELERQRQLIQKELSQLSQEEEAR
ENITIQKKLSSSDDEMESPERKYKKSRSPSKKKKEKKHKMKSPKAREIRTPSPVSRKRSE
DRDSPKKKHKKKKSLEKKQAEFSEEEDQEMKLKKIKMKGIKSKSSEKPILSFHSEEEYED
ELAKKAAAKKMSSWSRSPSRSISRSRSPSAEYERSRRSPDEYEKYLVQQQGNSPMSKKGK
KAIRAQLELENYMKEKYKKGKHRELTPEPREVKKDRSPSSDHADSKGGKKKGKKEQKKKH
KDSDKDYLSNSDTEMYSKSDKSYQSKKYDPPPDSREQRSSRRDDYEQQRGSPKEYVDSRS
TKGYKSQDRRGSSPLGRERRRSPSADLGLKAQEPYIKKEFSPSESLRSGSQYQRSRRDPS
PRDRRDEGPRYSKDRRLEEEGRGRDKEDPIRAGRYPSPGDRRYERGHEPVPSAEYEASRG
RYLDKGREGYDDRYAPTPTPHVEDLRDQPRDRYGQRGGLPQPEPYDRDRRGPPPDRFDRD
KRGPPEVFDRDKRGPSEYKRGPPPADGYDRDRYARDRDRYGGREQRYEARDPRYEGRDPY
EGRAPPPADYAWEQSRRGGAWPPASRTRGAPQPQPLMGPDRGYRPPDRYTDYGPPIPGAR
YDSPRDLRGERADWDRQDLREEFYPDRREWDSRHDERRDYPPPPRDDRFLDRPDDRFRDS
RYERKNDDRRDDSRSKRDRYGDDRSERGDRDKGDSLGRSDYDRDRRSGASIDRRQDLSQD
RKGDIRDRRREGSPDRQLGGPSRGASKEKHREEGDRRKEEAGDKKGERSVDRKREEKRRD
ERGRGTSDKQKAGSVEKPMEASPNRMREKSHDKKWEESPERLAGDRETEKVKGEVEDRGK
RDTEREERSSQGRDRTSRDKGDPTPTKKKDKKVKKSHKEKSKEEEKVEEHKDKKEKVESR
KESRKRGHDDKDRSVSPAPRREADLSPTPSTKRVRDISPTPSTKKARDLSPTPSTKKARE
ISPTPSTKRSRELSPAESQRSKREVSPALSHRSKSSAVAPVEKLSTKGGEEEEKSRSRDW
DRGSEKSDRKGRERHASSPFSVDEDRRSRISKRSRSPEVRGDQRDQDRRKKRRTDKEDDR
KSSDKPKEEDRKSVSRRSQGSQPDNKHSDWSEDSEEIPKTADNTEKEQVASALPEHLQTR
RQRSQSRSSIGSTGRSSHRDNRSRRSSFDRSRRDRSPDNRTSSRPSSKERSSKARASSIE
DREKERSKRETSESKTVAPSLKEEDKNDIDEEENSDDNLSLEEISSEEGSVIGEEEKKPS
IMDIVDIDWTSLVQSSQPKPASTGSALQRFRAPAIFASLGVSKEFAGEKLFQKIKSSCQQ
ELEAQREKDSGTPSKPVVYELQDSLKKVQTERSTAFSSKKDILAKIGNFRRALCARKDVE
IRRKLCRVDTNLDQSFNPPVPDQELCKLSAQLLSQCGDVFPVKKEETTPPAIKPEIQCA
NT seq
4860 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaattaagagaagagtaacagttgattctgctaagtctgtcccggatgaggga
gataggcgcaaaccaagtgtttttgaaaggcttggtcccggagctcgtaaacaactagac
gatcgtggagaaagttcctacaacactaagtgtcgccgttggttgataagcggagagtgt
aactttggaaacagttgtaaatttcagcacggtcctccgtataaaaaagccagaggagaa
gacaaccctgacaaatcgagagcgagacccaaacattttaagaaagaaatcaaggcgagt
gactcggactcggaccaacgaagtcgcagcaaggtcaagaaagagaagatccgatccatc
gtcagcaagaaggcggcggccccggacagtgatagcgacagctcggaagacagctgggag
caggaacgacccccttctgaccgcccagatttggattttaagaaggaacttgagctagag
cggcagcgccagctgattcagaaagagttaagtcaactgtcacaggaggaggaggccagg
gaaaacatcaccatccagaaaaagctgagtagcagtgacgacgaaatggaaagtccagag
aggaagtacaaaaaatccaggtctccaagtaagaagaagaaagagaagaagcataagatg
aagtctcccaaggccagggagatccggacccccagtccagtctccaggaaaagaagtgaa
gatagagactccccgaagaaaaaacacaagaagaagaaatcactagagaagaagcaagca
gagttctctgaagaagaagaccaagagatgaagttgaagaaaatcaaaatgaagggcatc
aagtccaaatcctctgagaaacccattctgagtttccattcagaggaagagtatgaggat
gagctagccaagaaagcagcggccaagaagatgtcctcatggtcaagatcaccctcacgc
tctatatctaggtcaaggtcaccttcagctgaatatgagaggtcacgaaggtcacctgat
gaatacgaaaagtatctggttcagcagcagggaaattcccccatgagcaagaagggaaag
aaagccatccgagctcagttggagttggaaaactacatgaaggagaaatacaagaagggc
aagcatagggaattgactcccgagccccgagaggtaaagaaggaccggtctccgtcatca
gatcacgcggattcgaagggaggtaaaaagaagggtaaaaaagaacagaagaagaagcat
aaggactctgataaagactacctgtccaacagtgacacagagatgtactctaaaagtgac
aaaagttaccaatctaagaagtacgatccaccaccggatagtcgggaacagagaagctca
aggagagacgactatgaacaacagagagggtccccgaaggagtacgtggacagtcggtca
acaaaggggtacaagtctcaggaccggcggggatctagtcccctggggagggagcgaagg
aggagtccgtcagcagacctcggactgaaagctcaggagccgtacatcaaaaaggagttc
tctccctctgagtccctcaggtcggggtcccagtaccaaagaagtcgtcgtgacccctcc
cccagggaccggagagatgaggggcccaggtactccaaagacaggaggctggaggaggaa
ggtaggggcagggacaaggaagaccccatccgggctggcaggtacccgtccccaggcgac
cgcaggtacgagaggggtcacgaacctgtccccagtgcagagtatgaagcaagtcgagga
agatacttggacaaaggtagggaggggtatgatgaccgctatgcccccacccctaccccc
cacgtagaggacctcagagatcagcctagggacaggtacggtcagagaggaggtctcccc
cagccagaaccctacgacagagacaggaggggacctcccccagacagattcgacagagac
aagcgaggcccaccagaggtattcgacagggacaagagaggtccctcggagtataagagg
ggacctccaccagctgatggctatgacagagatcgatatgccagggacagggatagatat
ggggggagggaacagagatatgaggccagggatccaagatatgaaggtcgtgacccctat
gagggacgtgcacctccccccgctgattatgcctgggaacagagccgccgtggtggtgcc
tggcctccagcatctagaacacgtggtgccccgcaaccacagcctctgatgggcccagac
cgaggttaccgaccccccgaccggtacacagattacggacccccaatcccaggtgccaga
tatgactcaccacgagaccttcggggggagagggcggactgggaccgccaggacctgagg
gaggagttctaccctgaccgcagggagtgggacagcagacatgatgagaggagggactat
ccccctccccccagggacgaccgcttcctggaccggcctgatgacaggttcagggacagt
cgctatgaaagaaaaaatgatgatagaagagatgacagtaggtcaaagagagatcgctat
ggcgatgataggtcagagagaggggatagggacaagggcgattctcttggaaggtcagac
tatgacagagatcgtaggagtggggcatccatagacagaaggcaggatttgtctcaggac
agaaaaggggacataagggatcgcagaagggaggggtcacctgacagacagctagggggc
ccatcaaggggagcatctaaagagaagcaccgtgaggagggagacagaaggaaggaggag
gcaggggataaaaaaggggagcgatcagtggataggaagagagaagaaaaaaggagggat
gaaagagggagagggacaagtgataaacagaaggctggctctgtagagaaacccatggag
gcctcacccaatcggatgagagagaagtcacatgacaagaagtgggaggagtcaccggaa
aggttggctggggatagagagacagagaaggtcaaaggagaagtggaggacagggggaag
agagataccgagagagaggagaggtccagtcaaggccgagataggacatctcgagataaa
ggcgaccctacaccgacaaagaaaaaggacaagaaagtaaaaaagtctcacaaggaaaaa
tccaaagaagaggaaaaagtagaggaacataaagacaagaaagagaaagtggagtcgaga
aaggagagcagaaaacgagggcatgatgataaagaccgatcagtgtcacctgcacccaga
agggaagctgacctatcccccaccccctctacaaagagggtcagggacatatcccctacc
ccctccacaaaaaaggccagggatttatcccccaccccatcaacgaagaaggctagggaa
atatccccaaccccttcaactaaaaggagcagggaattgtcaccagcagaatcccagcga
agcaagagagaggtgtcaccagctctttctcacagaagtaagtccagtgctgtggctcct
gtagagaagttgtcaaccaaggggggagaggaggaggagaaatcaaggtcacgggactgg
gaccgaggcagtgagaagtccgacaggaaggggcgggagagacacgcctctagtcccttc
tcagttgacgaagatagaaggtcaaggatctctaagaggtcaaggtcacctgaggtcaga
ggggatcagcgagatcaagacagaagaaagaaaaggagaacggataaggaagatgacaga
aaaagtagtgacaaacctaaagaagaggaccgcaaatcagtcagcagacgatctcagggc
agccagccagataacaagcacagtgattggtcagaggattcagaggaaatccccaaaaca
gcagacaacacagagaaagagcaggtggcatctgctttaccagaacatcttcaaactcgc
cgacagagaagtcagagtcgtagcagcataggcagcaccgggcgcagcagtcaccgtgac
aaccgaagcagacgatcctcgtttgaccgcagtagacgtgaccgctcaccagacaacaga
acctctagtcgtcccagcagcaaagaaaggtcaagcaaagctagagctagctctatagaa
gacagagaaaaggagaggagtaaaagagagacttcggagagcaaaactgtggctccatcc
cttaaagaagaagacaagaacgatatagatgaggaggagaattctgatgacaatttgtct
ctggaggagatatcaagtgaagagggcagtgttattggggaagaggaaaagaaacccagt
ataatggacatagtggatatagactggacaagtctggttcagtcttcacaacctaaaccg
gccagtactggttcagctcttcagcgcttcagggcacctgctatctttgcctcacttggg
gtttctaaggagtttgctggggagaagctgttccaaaaaatcaaaagttcttgtcaacag
gagcttgaggctcaaagagaaaaagattcagggacaccatcaaaaccagttgtgtatgaa
cttcaagattctcttaagaaagttcagacagagagatcaacggcattttcctccaaaaag
gacatcctagccaaaatcggcaacttccgaagggcgctgtgtgccaggaaagatgtcgag
atccgacggaaactctgtagagttgatacaaacttggaccaatccttcaaccctccagta
ccagaccaagagctgtgtaaactgagtgcacagctactgtctcagtgcggcgacgttttc
cccgtgaaaaaggaggagacaactcccccagccattaaacctgaaatacagtgtgcctaa
DBGET
integrated database retrieval system
