Magallana gigas (Pacific oyster): 105330823
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Entry
105330823 CDS
T03920
Name
(RefSeq) nipped-B-like protein isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
crg03036
]
105330823
Chromosome and associated proteins [BR:
crg03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
105330823
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
Cnd1
DUF5359
Motif
Other DBs
NCBI-GeneID:
105330823
NCBI-ProteinID:
XP_034311469
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Position
7:complement(3628141..3650607)
Genome browser
AA seq
1981 aa
AA seq
DB search
MNSDVPSVPITTLAGIHSLTDLLPELPLPTPTSSTPHNKTLLHNDKLKETSKRLLATRDA
GLTQQIVGVLRKTSTEHLDLKDSSGGEGIDRNSPELLKSILSQDPAIFQGRQYYENGSQK
DGYNVGNQHYQNNLLGVDPNKYQHPYGNYTPGIVNGEHPELSNQYPGYQGAAKSLGTIAS
PAQGSLAENSFYNDSQNHTDVNSAYHKKKLKNSEPIVLLEQLTNLPPHASGDASSTASAD
SYGERKKKKSSHPVVLLEPLDEQVLDRQTRSKTLKSIQHGGSVKTKESKKRAGRRYDSDE
EYDDRGKRRRRHSDSDSDSQAEVSRKKKKEKRHRRVNQQSLSVEELLESPTFKKFSASME
YILEASEDTNFGSLNPNDDDVECPTESLIANNLLNDLCGETAKLKSLGVMNQVPADRLVK
LLTVLQWNIRDGTKVTPIANQGQDEDEEEQRLWRSLIMERVLRSMNSVLIALHIMTSPDM
PKQVYLEDVIERIILYGKFQLQNTIFPEFDPVYKIDPKAKDGFHGSLKAKRARAAQVKHK
STINLFNKISDMIEKLAELVDIQELTDTTILQLSTLGVSPFFVENISEMQLNSMKLVTTI
FSKYEKHRQLILEDIFASLARLPSSKRNLRNYRLNSEESIQMVTALALQLIQCVIKLPTS
ATFTEPVGEEEAPSTSSSSSKKGHKSKRGQNSNDVVIVTSFENALRTGYNFLTVFLQKCT
VKSEEDYRPMFENFVQDLLSTVNKPEWPSSELLLSLLGKILVKQFSNKSVDMSLRVASLD
YLGIVASRLRKDAVSSQDNQGSIDEIITKVTSKESDEEGEMKSTTSGPEAEDQTQILQKA
MLDYLAFNSQSESAYWYAHLFYIAQWYRDVTVEADSLSKQSNKHRTEEEEEKVAEAIQTA
EQKKTFLLAQYESITKNASYRPPHSKLDYDGACLVARYLSSKRPFAKSFDVYLTQILRVL
NESAVAVRTKAMKCLTAVVEADPGILAREDMQKGVHYRFLDSSTSVREAAVELVGRFILI
RPELISQYYEMLSVRILDTGISVRKRVIKIFRDICLEQPDFDKIPEMCVKMIRRVNDEEG
IKKLVNEVFQSMWFTPISSREKDTTKLLTRVLNITDVVAACRDTGFEFFEQMLENLLKKD
EDGNINKSALTSCRQIVDCLVENVLRLEERSVDSNTGKGCSQRLVACLSTLHLFSKIKPD
LMVKHATTLQPYLDIKCSTQGDHFVLHYVARILEMVVPLMDHPSETFLAQLEEDMMKLIL
KHGMMVVESCISCLGAVVNSVSHNYSLVKDCFEKFFGVLVKLCYDHKEDPDNPQLRARKP
TLLRSLFTVGLLCKYFDLDRDMPDPSIESIKARVFEVLMYFVNHEDEIVKEKALSGLGFM
VIRHYEMMLGKEMTDLYYEYLDNEDSPDKLRIQVLRNLQNYLLEEEIRMHKADADWRKHA
KEEDLKEMGDIQSGMASTIMQVYLKHVLDSFFHSHTQVRLAAIQVVVLVLQQGLVHPVQC
VPYLISMCTDTEKVIRVKADQQLQEIDKKYPGFIHMKALQGLKMSYKLQQLLQANSKSCL
IRGHRESEGNTISLNNFLYTVLRTNRSHRRAILLSLLNLFDDSAKISLAEQLYIADNLAF
FPYQTQDEPLFIINQIDIIVSVSGSNILQSFKERLRLPKREAESMNMLVNAEGGNQTENG
VLPRPAIEEDEDEDDPDKLIAKLPADIKPLLDICYLAQGCILLLHLKHHLKETYGFSDSK
IHNYSQSDAKTYDKPVQRKFIVTFNPETVINLLNNKTKNRTIKKRSRKSHKRHRNDSGET
TSDSSDSSEDEQNSDDADERRKLIDDYLEFKDLMLSIDPPDEEEEGEENRSTCPQTPNPA
QGQTTPGSKSPRLPNPEGTGEESMDTTVEVHEEPSEKRVPPLVIRTGHSHHTPKSSRHHH
LFASDKKKIPVHASSSSSTSSSKNLSKSFPKPVPSKKKPKKRRKRYGSDSEDDSNDSDFV
L
NT seq
5946 nt
NT seq
+upstream
nt +downstream
nt
atgaatagtgatgtgcccagtgttccaattacaacactagctggcattcacagtcttact
gacctcttaccggagctaccattgccaaccccaacatcgtccaccccacacaacaaaact
ctgctgcataatgataagctgaaggagacatcgaagcgcctgctagcgacgcgagatgca
ggactcacacagcagatagtgggcgttcttcgaaagacatcaacagaacacttggatctg
aaagattcctcaggtggggagggaattgacagaaattctccagagttgttaaagtctatt
ttaagccaggatccagctatttttcaaggtcgacagtattatgagaatgggtcacaaaag
gatggatacaatgtaggtaatcaacattaccagaataatttattgggtgtggatccaaac
aaataccagcatccatatggcaattacactccaggcattgtaaatggcgaacatccagaa
ttatctaatcagtacccagggtaccagggggctgcaaaaagtctgggaacaattgcctca
ccagctcagggaagtttagcagagaactccttttacaatgattcacagaaccacacagat
gtcaatagtgcctaccacaagaaaaaactcaagaattctgaaccgatagtactccttgaa
cagttaacgaacctaccacctcacgcctcgggagatgcatcaagtacagcctcggctgat
tcctatggagagagaaagaaaaagaagagttctcatcctgttgtgttacttgaacctcta
gatgagcaggttctcgatagacaaacaagaagcaagactttaaagtccatacagcatgga
ggctcagtaaaaacaaaggaaagcaagaaaagagcaggaagaaggtacgacagtgatgag
gagtatgatgaccgaggcaagcggaggagacgtcacagtgacagcgactccgactcccag
gcggaagtttcaagaaagaagaagaaggaaaaacggcaccggcgtgtgaaccagcagtcc
ctgtctgtggaggagttactggagagtccgaccttcaagaagttcagtgcctctatggag
tatatcttggaggcgtctgaggacaccaacttcggatccctgaacccaaacgatgatgat
gtggagtgtccaactgagagtctgattgcaaacaatcttctgaatgatctgtgtggagaa
actgctaaactcaagtctttaggagtcatgaatcaggtgcctgctgacagactggtgaag
ctgttgacagtactacagtggaatatacgagacggaaccaaagtcacacctatcgctaac
caaggccaggatgaggatgaggaggagcagaggctgtggaggagtctcatcatggagcga
gtcctgaggagcatgaactcggtcctcattgccctccacatcatgacctcaccagacatg
cccaaacaggtgtacttggaggacgtcatcgagaggattatactgtacgggaaattccag
ctacaaaacactatcttcccagaatttgatccagtatacaaaattgatcccaaagcaaag
gatggatttcatgggagtttgaaggccaagagggccagagctgctcaagtgaagcacaag
tctaccattaatctgttcaacaaaatctcagacatgatagagaagctggccgagcttgtg
gacatccaggaactcacagacaccaccatcctacagttatctacattaggagtgtctcct
ttctttgtggaaaacattagcgaaatgcagctgaattctatgaagcttgtgaccacgatt
ttctcgaagtatgagaaacatcgtcaattaattctggaggatatatttgccagtttagcg
aggttaccatctagtaagagaaatcttaggaattacaggttgaactctgaggagtccatt
cagatggtgacagccctggccctacaactgatccagtgtgtcatcaaactgccgacctcg
gccaccttcacagagccagtgggggaggaggaggctccatcaacctcatcctcctcgtcc
aagaaaggccacaaatctaagcggggacagaattccaatgatgttgtcattgtcacctcc
tttgagaatgctttgaggacagggtataattttctcacagtgttcttgcaaaaatgtaca
gtgaagagtgaggaggactaccggcccatgtttgagaactttgtacaggatctcctgtcc
accgtcaacaaaccagagtggccctcctcggagctccttcttagtctgctaggcaaaatt
ctggtgaagcagttcagcaataaatcagtggacatgtctctcagggtggcctcccttgat
tatctgggcattgtggcctctagattacggaaggacgccgtgtctagtcaagacaaccag
ggctctattgatgaaattatcacaaaggtaacttcaaaagagagtgatgaagagggggaa
atgaaatccacaacttcagggcctgaggctgaggaccagacacagattcttcagaaggcc
atgctggactatctggcattcaacagtcaaagtgaatcagcttactggtatgcccacctg
ttctatatagcccagtggtacagagatgttactgtagaagcagatagcctgtccaagcag
tcaaacaaacacagaaccgaagaagaggaggagaaggtagcagaggcaattcagactgct
gaacagaagaaaacattcctgttggcgcagtacgagtccatcacaaagaatgcctcctac
aggccacctcactccaagttagattatgatggcgcttgtctcgttgcaagatatttatca
tctaaaagaccatttgcaaaaagctttgatgtgtacctaacccagatcttgcgagttttg
aacgagtcagctgtagctgtgaggaccaaggccatgaagtgtctgactgccgtagtggaa
gcagacccagggatcctagccagggaggacatgcagaaaggcgtccactaccgcttcctg
gattcctcgacgtcggtgcgagaggcggcggtggagttggtggggagatttatactaatc
cgtccagagctcatatctcagtactacgagatgctctctgtccgaatactggacacaggt
atcagtgttagaaagcgggtcatcaaaatatttcgtgatatttgtttggaacaaccagat
tttgacaaaattcctgaaatgtgtgtcaaaatgatccgacgagttaatgatgaggaggga
atcaagaaactggtcaatgaggtatttcaatccatgtggtttacgccaatcagcagccga
gaaaaggataccaccaaactcttaacaagggtgctaaatataacagacgtcgttgcagca
tgtagggatacaggatttgaattctttgaacaaatgttagaaaatttacttaaaaaagac
gaggatggcaatatcaataagagtgccctgacgtcttgtcgtcagatcgtggactgtctg
gtggagaatgtcctccgtctggaggaaaggagtgtggactccaacacgggtaagggttgc
agccagagactggtggcctgtctgtccactctacatctcttcagcaagatcaaaccggac
ctgatggtgaaacatgccaccacactacagccatacttagacatcaagtgtagtactcag
ggtgatcactttgttctccactacgttgctcggattttagagatggtggtccctctgatg
gaccaccccagtgagacgttcctggcccagctagaggaggacatgatgaagctaatcctc
aaacacggaatgatggttgttgagagctgtatcagctgtctaggtgcagttgttaactct
gtcagccacaactactcactggtcaaggactgctttgagaagttctttggtgtgctagtg
aagctgtgctatgatcataaggaggaccccgacaatccccagcttagagctcggaagccc
acactgctccgctccctctttaccgtgggcttgctctgtaaatactttgatctggacaga
gatatgccagacccctcaatagagtcgatcaaggcgcgggtatttgaagtactgatgtac
tttgttaaccatgaggatgaaattgtcaaagagaaggcactgagtggtctaggttttatg
gtcatacgccactatgagatgatgttgggtaaagagatgacagatttatattatgaatat
ctggataatgaggattctcccgacaaactcagaatacaggtattgagaaatcttcaaaat
tacttactggaagaagaaatcaggatgcacaaagctgatgcagactggaggaagcatgca
aaagaggaagatctgaaggagatgggggatatacaatcagggatggccagcaccattatg
caggtgtacctgaagcacgtgctggactccttcttccactcccacactcaggtgcgactg
gcggccatacaggtggtggtgcttgttctacagcagggactggtgcaccctgtgcagtgt
gttccctacctgattagtatgtgtactgatacggagaaagtcatacgtgtgaaagcagat
caacagcttcaggaaatagacaagaaatatccaggctttatccatatgaaagctttacaa
ggtctgaagatgtcgtacaaactgcagcagttactacaggccaacagtaagagctgtttg
atccgaggtcaccgagaaagtgaaggcaacaccatcagtctcaacaacttcctgtacacc
gttttacggaccaaccgctctcatcgccgtgccatactcctctcactgcttaatctcttt
gacgactcagcaaaaatctcactagcagaacagctgtacatagctgacaacctagccttc
ttcccctaccagactcaggacgagcccttgtttatcatcaaccagatcgacatcattgtt
tctgtgtccggctccaacattctccagtccttcaaagagcgtttacgcttgcctaagaga
gaagccgaaagcatgaacatgttggtcaacgctgagggtgggaaccagacagagaatggg
gtgttaccacggccggccattgaggaggatgaggatgaagatgacccagacaaactcata
gcgaagctgccagcagatatcaaacctttgttggatatttgttacctagcacagggctgt
attttactgttacacctgaagcaccacttaaaagagacctatggattttctgacagcaaa
attcacaactattctcaatcggatgcaaaaacatatgataaaccagtgcagaggaaattc
atagtgacatttaatcctgagactgtgataaacttgttaaacaataaaacgaaaaatagg
actattaagaaaaggtcgcggaaatcacataaacgacacaggaatgattcaggggagact
actagtgacagcagtgactcgagcgaggatgaacaaaacagtgatgacgcggacgagaga
cgcaagcttattgatgattatttagagtttaaggatctgatgttaagtattgaccctcct
gatgaggaggaggagggggaggagaatcgcagcacctgtcctcaaacccccaaccccgcc
caagggcagaccactccaggcagcaaatcaccacgactaccaaatccagagggaacaggc
gaagagtcgatggacaccacagtggaagttcacgaggagccgtcagagaaaagggtccct
ccactcgtcattagaacaggtcatagtcaccacacccccaagtcctcgcgccatcatcac
ctcttcgcctccgacaaaaagaaaattccagttcacgcatcatcatcatcttcaacctct
tcttccaaaaacttatcaaaatcgtttcccaagcccgtacccagtaaaaagaaaccaaag
aagcgacggaaacgatatggcagcgacagtgaggatgacagtaacgacagtgattttgtg
ttataa
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