Magallana gigas (Pacific oyster): 105330850
Help
Entry
105330850 CDS
T03920
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm2
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg03018
RNA degradation
crg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105330850
09123 Folding, sorting and degradation
03018 RNA degradation
105330850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crg03019
]
105330850
03041 Spliceosome [BR:
crg03041
]
105330850
Messenger RNA biogenesis [BR:
crg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
105330850
mRNA degradation factors
5'-3' decay
Lsm complex
105330850
Spliceosome [BR:
crg03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
105330850
Complex C
U2 snRNP components
105330850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
105330850
NCBI-ProteinID:
XP_034301241
LinkDB
All DBs
Position
2:43953449..43956251
Genome browser
AA seq
96 aa
AA seq
DB search
MLFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQFLNIKLTDITVTDPDKYPHMLSVKNC
FIRGSVVRYVQLPADECDTQLLQDAARKEAAQNRQR
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgcttttctattcattttttaaatcactggttgggaaggatgttgtcgtggaactgaag
aacgacctcagtatttgtgggactcttcactcagtggaccagtttctgaacataaagtta
acagatattacggtaacagatccagacaagtacccccatatgctttctgtgaaaaactgt
tttattcgtggctctgtcgtgcgctatgttcaacttccggctgatgagtgcgacacacaa
cttttacaagatgcagcacgcaaagaagcagcacaaaacagacagaggtga
DBGET
integrated database retrieval system
