Magallana gigas (Pacific oyster): 105331129
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Entry
105331129 CDS
T03920
Name
(RefSeq) protocadherin-9
KO
K16498
protocadherin delta 1
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
105331129
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
crg01009
]
105331129
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
crg04515
]
105331129
Protein phosphatases and associated proteins [BR:
crg01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
105331129
Cell adhesion molecules [BR:
crg04515
]
Cadherins
Protocadherins
105331129
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Cadherin_2
Cadherin_pro
Ig_CFAP65_4th
Vpu
Motif
Other DBs
NCBI-GeneID:
105331129
NCBI-ProteinID:
XP_065932443
LinkDB
All DBs
Position
2:complement(36494005..36503216)
Genome browser
AA seq
1030 aa
AA seq
DB search
MMALFWSLFWSALCLLFLPCSYGSIHFTLQEEEPLGTLVGNIPKESSLGNNMTDQEFQSL
KYDFLDQTKMASLFTINNDNGNIYTAVVIDRETECSFKEVCSLDFDVMVRSSVSTKYEII
SVNILILDINDKSPTFQPDVITVQISESEAIGTTIGIEGATDSDSSAINRIQSYKIVPSD
GPFGLNATKKDGGYILKLVLRRILNREQINSYQVSIVAYDGGLNPNSGTLSVTVEVTDDN
DNSPVFTQSVYEAKVREGVKRGTSVLRVSASDADEGKNAEIRYHFSPTQSDLDEIKKIFA
INDTSGDVLVVGDLVYEAGKVYEISIEATDLGQQPTVSQCIVRITVEDFGNNPPIVRVNF
LSSNSIGMVNVSESSKPGLVIAHVNVEDTDSGSNGIVTCDISDNSFALEAVQGKGYVVLI
KLDLDRESKAVHNVTVTCQDQGTPVLMSASHFLVRVEDENDHSPQFKQAMYFSAINENNA
VGDYIVQVLAVDDDLGINAAIRYQLHSDSHNMFAINPETGVITANQRFDRETNLFYKFTV
IAMDGGSPPQSSTASVLLNISDINDNPPVFEVAEFQFFVMENSDPDTTIGSVSATDKDEG
KNGDLVFTLSPNSQVPFTVHTDGSIVSTKSLDRELSSKYSFKVWAHDLGTPSLSSQIMVN
VLVGDSNDNAPIIVYPSTENNSMSISYLAPVGSPIASIKAYDLDEEGPNSQLEYFFNNGN
ELDIFYIGKNTGKISLKKTYHVNMDVTFAVSVIVRDKGDNPRSNTTNFYIVLKYSNGTMV
EALEDNGNKNIVITVIIVCFTILISAVIFTIICILCRQDKKLKKSHQQGPEKRFYDEKIP
EVIMEVTPDISGVLCNPGDTPSKKKKKEVSFTLNEENPDMFPAYNNPGYDRALPQNSPTL
QPDYDGAPTTFQGLPPKSQYSLPNRPPVHKQRQHLPSTDNFSDSSGDTTTADSGRGGSDL
DLSHPQRQDDMGSEYAKLKPPGSLHKVHLPHFDNFIQHTHGHLKSQPYSALYPPTTNSNS
SSGEWNPSYV
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atgatggcgttgttttggtcgttgttttggtcggccttgtgtttgttatttttgccatgc
tcctatggatctatccatttcactctccaggaagaggaacccctgggaacactggtgggc
aacattccaaaggagagtagcctgggaaacaacatgactgaccaagagttccaaagtctc
aaatacgatttcttggaccaaaccaaaatggcttctttgtttaccatcaataatgacaat
ggaaacatttatactgcagttgtgattgacagagagacagagtgcagctttaaagaagtt
tgttctttagattttgatgtgatggtgcgttcaagtgtcagtacaaagtatgaaataatc
tcagtgaacattcttattctggatatcaatgacaagagtccaacatttcaacctgatgtg
atcacagtgcagatatctgaatcagaagccatcggaacaaccattggcatagaaggagca
acagactctgattccagtgctataaatagaatccagagctataaaattgttcctagtgac
ggtccatttggattaaatgcgacaaaaaaagatggcggatatattttgaaactagtttta
cgtaggatcctaaacagagagcagataaactcgtaccaggtgagcattgtggcctatgat
ggaggactgaaccctaactcagggactttgtcagtgaccgtggaggtcacggacgacaat
gataactccccagtcttcacgcagagtgtatatgaggccaaagtcagggaaggagtcaaa
aggggtacatctgtacttagagtgtctgcctctgatgcagatgaaggaaagaatgctgag
atcaggtaccacttcagtccaactcagtcggatctggacgaaataaagaagatttttgcg
atcaatgacaccagtggagatgttctagttgtgggggatttggtgtatgaggcgggcaag
gtgtatgagatcagtattgaggccacagatctgggacagcagccgactgtgtctcagtgc
atcgtcaggatcaccgttgaggatttcggaaacaaccctcccatagtacgagtcaacttc
ttgtcctccaacagtattggcatggtcaacgtatcggaatcctccaaaccagggctagtg
attgcacatgtaaatgttgaagatactgactctggctccaatggaatagtgacatgtgat
atctctgacaattcttttgctttggaggctgtgcaaggaaaggggtatgttgtgcttata
aagttggatttggacagagagagtaaagccgtccataatgtaactgtaacttgtcaggat
caggggaccccggtcttaatgtctgcctctcacttccttgtacgcgttgaggatgagaat
gaccacagtccacagttcaagcaagccatgtacttctctgctatcaatgagaacaatgct
gtcggagactatattgtgcaggtcttggctgttgatgatgatttaggcattaatgcagcc
atacgatatcagctccactcagactcccacaacatgtttgccatcaatccagagacaggg
gtgatcacagccaatcagcgattcgacagagaaaccaatctcttctacaagtttactgtc
attgccatggatggtggcagcccccctcaatccagcactgcctcagtgctgctgaacatc
agtgacatcaatgataacccccctgtgtttgaggtagcagagttccagttctttgtgatg
gagaattcggatcctgatactaccattggatcagtcagtgccacagacaaagatgaaggg
aagaacggtgaccttgtgttcactctctcacctaacagtcaagttcctttcacggttcac
accgatggcagcatagtatccaccaaatccctggacagggaactcagtagtaaatatagc
tttaaggtctgggctcatgacttgggtaccccctcacttagtagccagatcatggtcaat
gttttagtgggcgacagcaatgacaatgctccaattattgtatacccctcgacagaaaat
aattcgatgtcaatttcctatctggctcccgtgggttctcctatagccagtatcaaggcc
tatgatttggatgaagaaggtccaaatagtcagctggaatatttctttaataatggaaat
gagcttgacattttctacataggaaaaaacacaggaaaaatttctctgaagaaaacttac
catgtcaacatggacgttacttttgctgtgtctgttattgtcagagacaagggagataat
ccaagaagtaacacaacgaacttctatattgtgctaaaatactcaaatgggacgatggta
gaagctctcgaggataatggcaacaaaaatattgtcatcaccgtcatcattgtctgcttt
accattttgatctccgcagtcatcttcacaatcatctgcattctttgtcgccaggacaag
aaactaaaaaaatctcatcagcaaggcccagaaaaaagattttatgatgagaaaatccca
gaagttataatggaggtcactccggacatcagcggtgttctgtgtaaccccggggacaca
ccctccaagaagaagaagaaggaggtcagcttcaccctgaatgaggagaacccggacatg
ttcccagcatacaacaacccgggctacgacagggccctccctcagaattctccaactctt
caacctgattatgatggagcacccacgactttccaaggtttaccccccaaatctcagtat
tctttacctaacagaccccctgttcacaaacagagacagcatttgccatcaacagacaac
tttagtgattcttcaggggacacaactactgcagacagcgggagagggggcagtgacctt
gacctcagtcatcctcagcgtcaagatgatatgggatcagagtatgccaaactgaagccc
cctggatcactacacaaagtgcacctcccacattttgacaattttattcaacatacacat
ggacacttaaaatctcagccctacagtgctttatatccacctaccactaactcaaacagt
tcatccggggagtggaatccatcctatgtgtga
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