KEGG   Crassostrea gigas (Pacific oyster): 105331187
Entry
105331187         CDS       T03920                                 
Name
(RefSeq) retinoic acid receptor alpha-A
  KO
K08532  RAR-related orphan receptor alpha
Organism
crg  Crassostrea gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:crg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:crg03000]
    105331187
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:crg03310]
    105331187
Transcription factors [BR:crg03000]
 Eukaryotic type
  Zinc finger
   Cys4 thyroid hormone receptor-like
    105331187
Nuclear receptors [BR:crg03310]
 1. Thyroid hormone like
  1F. RAR-related orphan receptor
   105331187
SSDB
Motif
Pfam: zf-C4 Hormone_recep
Other DBs
NCBI-GeneID: 105331187
NCBI-ProteinID: XP_011431576
UniProt: K1PLP6
LinkDB
Position
LG1:33400498..33411039
AA seq 525 aa
MNIKKTRQLLLMKKNKRTKKKKADSKERLTFPPCKVCSGNATGIHYGVHTCEPCKAFFRR
AITDKNKYACLKENNCEITAQKRGNCSACRLQKCFDLGMSKSAVRQGRYTIELRTNTILE
VKRLANKTAVEVSVDSQKNKPDKQTCPDPSANTGPCDMETEEYSQSMGQSVRGETSSCDS
DMALSLLSTDNGLNSPDCNLPPKKKVRLRDMIDVPEECVMTPGSKRLCRVSCDELAMGAE
NVTLSERQIQCLIQTLVKAHDTIYPNFKKYFEKEHQQYLEEKFLASKKVQEDVFGIKSLL
DKEEFEKVYRATGIDVDGRLEFIKKIFSHRERSLMKFITFAKCLEGFNTLSMNDKINLVK
YGEHEYWVLGHFTHYHPEINATIGHEIQVSLENNEKIFGKPASEELLKMFCTLKDMDLMY
QEVIILRGIVLFSRDRCELESAPIVESVQWKLIQCLQYLVEHFHPEEPRKFSQCLQLLTD
LRDVSEQHQQRTIKGQYDDYTMDIIKDHPLIYEALEDSMSCLKTS
NT seq 1578 nt   +upstreamnt  +downstreamnt
atgaacatcaagaaaacaagacagcttctactgatgaaaaaaaacaaaaggacaaagaaa
aaaaaagctgattccaaagaacggctgacattccctccctgtaaagtctgctcgggaaat
gctacagggattcattatggagtccacacctgcgagccttgcaaggccttcttcagaaga
gctataacagacaaaaacaagtatgcctgtctgaaagaaaataactgtgaaataacagca
cagaagagaggaaactgctctgcctgtcgacttcagaaatgcttcgatcttggaatgtct
aagagtgctgtgagacaaggacgctatacaatagagcttcggacaaacaccattttggag
gtaaagaggctggccaataagacagcagtagaggtatcggttgacagccagaaaaacaag
ccagataaacagacctgtccggacccctcggccaacactggaccatgtgacatggagact
gaggaatacagccaatcaatgggacaaagtgtccgcggagaaacatcaagctgtgacagt
gacatggctctatcccttctctcaaccgataacgggttgaactccccagactgtaatcta
ccaccgaaaaagaaagttcgacttcgtgacatgattgatgtgccggaggaatgtgtaatg
acaccgggctcaaagagactatgtcgggtcagctgtgatgaactggccatgggtgccgaa
aatgtgactctgtcggagagacaaattcagtgcttaatacagactttggtgaaagctcat
gacacaatttatcccaactttaagaaatactttgaaaaggagcaccaacaataccttgaa
gaaaagtttcttgcttcaaagaaggtacaagaagatgtttttggaatcaagagtctgctg
gataaggaagagtttgaaaaggtgtaccgggccactggtatagatgtggacggtaggctg
gagttcataaaaaagatcttcagccaccgagagaggtccctgatgaagttcatcacgttc
gctaaatgtttggagggcttcaacactctgagtatgaatgacaaaatcaaccttgtcaaa
tatggggagcatgaatattgggttcttggacattttacacactatcatcctgaaataaat
gctactattggacacgaaatccaggtttcattggaaaataatgaaaaaatatttggaaaa
cctgcttcagaggagctgttgaaaatgttctgcacattgaaagatatggacttaatgtat
caagaggtcattattctcagagggattgttttgttttcaagagatcgctgtgagttagaa
tctgctcccatagttgagtcggtccagtggaaattaatccagtgcttacagtaccttgtg
gagcacttccatccggaagaacccaggaagttttctcagtgccttcagctactcacagac
ctgcgtgacgtaagtgagcaacatcagcagagaaccattaaaggccagtacgacgactac
acaatggacatcataaaggaccatcccctcatttacgaagccctcgaagattccatgtca
tgtctgaagactagctga

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