Magallana gigas (Pacific oyster): 105331187
Help
Entry
105331187 CDS
T03920
Name
(RefSeq) nuclear receptor ROR-alpha A
KO
K08532
RAR-related orphan receptor alpha
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
crg03000
]
105331187
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
crg03310
]
105331187
Transcription factors [BR:
crg03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
105331187
Nuclear receptors [BR:
crg03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
105331187
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
C2c1_helical
Motif
Other DBs
NCBI-GeneID:
105331187
NCBI-ProteinID:
XP_011431576
UniProt:
K1PLP6
LinkDB
All DBs
Position
5:34744069..34752129
Genome browser
AA seq
529 aa
AA seq
DB search
MLGEDEHQENKTASTDEKKQKTKKKKADSKERLTFPPCKVCSGNATGIHYGVHTCEPCKA
FFRRAITDKNKYACLKENSCEITAQKRGNCSACRLQKCFDLGMSKSAVRQGRYTIELRTN
TILEVKRLANKTAVEVSVDSQKNKPAKQTCPDPSANTGPCDMETEEYSQSMGQSVRGETS
SCDSDMALSLLSTDNGLNSPDCNLPPKKKVRLRDTIDVPEECVMTPGSKRLCRVSCDELA
MGAENVTLSERQIQCLIQTLVKAHDTIYPNFKKYFEKEHQQYLEEKFLASKKVQEDVFGI
KSLLDKEEFEKVYRATGIDVDGRLEFIKKIFSHRERSLMKFITFAKCLEGFNTLSMNDKI
NLVKYGEHEYWVLGHFTHYHPEINATIGHEIQVSLENNEKIFGKPASEELLKMFCTLKDM
DLMYQEVIILRGIVLFSRDRCELESAPLVESVQWKLIQCLQYLVEHFHPEEPRKFSQCLQ
LLTDLRDVSEQHQQRTIKGQYDDYTMDIIKDHPLIYEALEDSMSCLKTS
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgttaggggaagatgaacatcaagaaaacaagacagcttccacagatgaaaaaaaacaa
aagacaaagaaaaaaaaagctgattccaaagaacggctgacattccctccctgtaaagtc
tgctcgggaaatgctacagggattcattatggagtccacacctgcgagccttgcaaggcc
ttcttcagaagagctataacagacaaaaacaagtatgcctgtctgaaagaaaatagctgt
gaaataacagcacagaagagaggaaactgctctgcctgtcgacttcagaaatgcttcgat
cttggaatgtcaaagagtgctgtgagacaaggacgctatacaatagagcttcggacaaac
accattttggaggtaaagaggctggccaataagacagcagtagaggtatcggttgacagc
cagaaaaacaagccagctaaacagacctgtccggacccctcggccaacactggaccatgt
gacatggagactgaggaatacagccaatcaatgggacaaagtgtccgcggagaaacatca
agctgtgacagtgacatggctctatcccttctctcaaccgataacgggttgaactcccca
gactgtaatctaccaccgaaaaagaaagttcgacttcgtgacacgattgatgtgccggag
gaatgtgtaatgacaccgggctcaaagagactatgtcgggtcagctgtgatgaactggcc
atgggtgccgaaaatgtgactctgtcggagaggcaaattcagtgcttaatacagactttg
gtgaaagctcatgacacaatttatcccaactttaagaaatactttgaaaaggagcaccaa
caataccttgaagagaagtttcttgcttcaaagaaggtacaagaagatgtttttggaatc
aagagtctgctggataaggaagagtttgaaaaggtgtaccgggccactggtatagatgtg
gacggtaggctggagttcataaaaaagatcttcagccaccgagagaggtccctgatgaag
ttcatcacgttcgctaaatgtttggagggcttcaacactctgagtatgaatgacaaaatc
aaccttgtcaaatatggggagcatgaatattgggttcttggacattttacacactatcat
cctgaaataaatgctactattggacacgaaatccaggtttcattggaaaataatgaaaaa
atatttggaaaacctgcttcagaggagctgttgaaaatgttctgcacattgaaagatatg
gacttaatgtatcaagaggtcattattctcagagggattgttctgttttcaagagatcgc
tgtgagttagaatctgctcccttggttgagtcggtccagtggaagttaatccagtgtcta
cagtaccttgtggagcacttccatccggaagaacccaggaagttttctcagtgccttcag
ctactcacagacctgcgtgacgtaagtgagcaacatcagcagaggaccattaaaggccag
tacgacgactacacaatggacatcataaaggaccatcccctcatttacgaggccctcgaa
gattccatgtcatgtctgaagactagctga
DBGET
integrated database retrieval system