Crassostrea gigas (Pacific oyster): 105331187
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Entry
105331187 CDS
T03920
Name
(RefSeq) retinoic acid receptor alpha-A
KO
K08532
RAR-related orphan receptor alpha
Organism
crg
Crassostrea gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
crg03000
]
105331187
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
crg03310
]
105331187
Transcription factors [BR:
crg03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
105331187
Nuclear receptors [BR:
crg03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
105331187
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
105331187
NCBI-ProteinID:
XP_011431576
UniProt:
K1PLP6
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Position
LG1:33400498..33411039
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AA seq
525 aa
AA seq
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MNIKKTRQLLLMKKNKRTKKKKADSKERLTFPPCKVCSGNATGIHYGVHTCEPCKAFFRR
AITDKNKYACLKENNCEITAQKRGNCSACRLQKCFDLGMSKSAVRQGRYTIELRTNTILE
VKRLANKTAVEVSVDSQKNKPDKQTCPDPSANTGPCDMETEEYSQSMGQSVRGETSSCDS
DMALSLLSTDNGLNSPDCNLPPKKKVRLRDMIDVPEECVMTPGSKRLCRVSCDELAMGAE
NVTLSERQIQCLIQTLVKAHDTIYPNFKKYFEKEHQQYLEEKFLASKKVQEDVFGIKSLL
DKEEFEKVYRATGIDVDGRLEFIKKIFSHRERSLMKFITFAKCLEGFNTLSMNDKINLVK
YGEHEYWVLGHFTHYHPEINATIGHEIQVSLENNEKIFGKPASEELLKMFCTLKDMDLMY
QEVIILRGIVLFSRDRCELESAPIVESVQWKLIQCLQYLVEHFHPEEPRKFSQCLQLLTD
LRDVSEQHQQRTIKGQYDDYTMDIIKDHPLIYEALEDSMSCLKTS
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcaagaaaacaagacagcttctactgatgaaaaaaaacaaaaggacaaagaaa
aaaaaagctgattccaaagaacggctgacattccctccctgtaaagtctgctcgggaaat
gctacagggattcattatggagtccacacctgcgagccttgcaaggccttcttcagaaga
gctataacagacaaaaacaagtatgcctgtctgaaagaaaataactgtgaaataacagca
cagaagagaggaaactgctctgcctgtcgacttcagaaatgcttcgatcttggaatgtct
aagagtgctgtgagacaaggacgctatacaatagagcttcggacaaacaccattttggag
gtaaagaggctggccaataagacagcagtagaggtatcggttgacagccagaaaaacaag
ccagataaacagacctgtccggacccctcggccaacactggaccatgtgacatggagact
gaggaatacagccaatcaatgggacaaagtgtccgcggagaaacatcaagctgtgacagt
gacatggctctatcccttctctcaaccgataacgggttgaactccccagactgtaatcta
ccaccgaaaaagaaagttcgacttcgtgacatgattgatgtgccggaggaatgtgtaatg
acaccgggctcaaagagactatgtcgggtcagctgtgatgaactggccatgggtgccgaa
aatgtgactctgtcggagagacaaattcagtgcttaatacagactttggtgaaagctcat
gacacaatttatcccaactttaagaaatactttgaaaaggagcaccaacaataccttgaa
gaaaagtttcttgcttcaaagaaggtacaagaagatgtttttggaatcaagagtctgctg
gataaggaagagtttgaaaaggtgtaccgggccactggtatagatgtggacggtaggctg
gagttcataaaaaagatcttcagccaccgagagaggtccctgatgaagttcatcacgttc
gctaaatgtttggagggcttcaacactctgagtatgaatgacaaaatcaaccttgtcaaa
tatggggagcatgaatattgggttcttggacattttacacactatcatcctgaaataaat
gctactattggacacgaaatccaggtttcattggaaaataatgaaaaaatatttggaaaa
cctgcttcagaggagctgttgaaaatgttctgcacattgaaagatatggacttaatgtat
caagaggtcattattctcagagggattgttttgttttcaagagatcgctgtgagttagaa
tctgctcccatagttgagtcggtccagtggaaattaatccagtgcttacagtaccttgtg
gagcacttccatccggaagaacccaggaagttttctcagtgccttcagctactcacagac
ctgcgtgacgtaagtgagcaacatcagcagagaaccattaaaggccagtacgacgactac
acaatggacatcataaaggaccatcccctcatttacgaagccctcgaagattccatgtca
tgtctgaagactagctga
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