KEGG   Magallana gigas (Pacific oyster): 105331187
Entry
105331187         CDS       T03920                                 
Name
(RefSeq) nuclear receptor ROR-alpha A
  KO
K08532  RAR-related orphan receptor alpha
Organism
crg  Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:crg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:crg03000]
    105331187
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:crg03310]
    105331187
Transcription factors [BR:crg03000]
 Eukaryotic type
  Zinc finger
   Cys4 thyroid hormone receptor-like
    105331187
Nuclear receptors [BR:crg03310]
 1. Thyroid hormone like
  1F. RAR-related orphan receptor
   105331187
SSDB
Motif
Pfam: zf-C4 Hormone_recep C2c1_helical
Other DBs
NCBI-GeneID: 105331187
NCBI-ProteinID: XP_011431576
UniProt: K1PLP6
LinkDB
Position
5:34744069..34752129
AA seq 529 aa
MLGEDEHQENKTASTDEKKQKTKKKKADSKERLTFPPCKVCSGNATGIHYGVHTCEPCKA
FFRRAITDKNKYACLKENSCEITAQKRGNCSACRLQKCFDLGMSKSAVRQGRYTIELRTN
TILEVKRLANKTAVEVSVDSQKNKPAKQTCPDPSANTGPCDMETEEYSQSMGQSVRGETS
SCDSDMALSLLSTDNGLNSPDCNLPPKKKVRLRDTIDVPEECVMTPGSKRLCRVSCDELA
MGAENVTLSERQIQCLIQTLVKAHDTIYPNFKKYFEKEHQQYLEEKFLASKKVQEDVFGI
KSLLDKEEFEKVYRATGIDVDGRLEFIKKIFSHRERSLMKFITFAKCLEGFNTLSMNDKI
NLVKYGEHEYWVLGHFTHYHPEINATIGHEIQVSLENNEKIFGKPASEELLKMFCTLKDM
DLMYQEVIILRGIVLFSRDRCELESAPLVESVQWKLIQCLQYLVEHFHPEEPRKFSQCLQ
LLTDLRDVSEQHQQRTIKGQYDDYTMDIIKDHPLIYEALEDSMSCLKTS
NT seq 1590 nt   +upstreamnt  +downstreamnt
atgttaggggaagatgaacatcaagaaaacaagacagcttccacagatgaaaaaaaacaa
aagacaaagaaaaaaaaagctgattccaaagaacggctgacattccctccctgtaaagtc
tgctcgggaaatgctacagggattcattatggagtccacacctgcgagccttgcaaggcc
ttcttcagaagagctataacagacaaaaacaagtatgcctgtctgaaagaaaatagctgt
gaaataacagcacagaagagaggaaactgctctgcctgtcgacttcagaaatgcttcgat
cttggaatgtcaaagagtgctgtgagacaaggacgctatacaatagagcttcggacaaac
accattttggaggtaaagaggctggccaataagacagcagtagaggtatcggttgacagc
cagaaaaacaagccagctaaacagacctgtccggacccctcggccaacactggaccatgt
gacatggagactgaggaatacagccaatcaatgggacaaagtgtccgcggagaaacatca
agctgtgacagtgacatggctctatcccttctctcaaccgataacgggttgaactcccca
gactgtaatctaccaccgaaaaagaaagttcgacttcgtgacacgattgatgtgccggag
gaatgtgtaatgacaccgggctcaaagagactatgtcgggtcagctgtgatgaactggcc
atgggtgccgaaaatgtgactctgtcggagaggcaaattcagtgcttaatacagactttg
gtgaaagctcatgacacaatttatcccaactttaagaaatactttgaaaaggagcaccaa
caataccttgaagagaagtttcttgcttcaaagaaggtacaagaagatgtttttggaatc
aagagtctgctggataaggaagagtttgaaaaggtgtaccgggccactggtatagatgtg
gacggtaggctggagttcataaaaaagatcttcagccaccgagagaggtccctgatgaag
ttcatcacgttcgctaaatgtttggagggcttcaacactctgagtatgaatgacaaaatc
aaccttgtcaaatatggggagcatgaatattgggttcttggacattttacacactatcat
cctgaaataaatgctactattggacacgaaatccaggtttcattggaaaataatgaaaaa
atatttggaaaacctgcttcagaggagctgttgaaaatgttctgcacattgaaagatatg
gacttaatgtatcaagaggtcattattctcagagggattgttctgttttcaagagatcgc
tgtgagttagaatctgctcccttggttgagtcggtccagtggaagttaatccagtgtcta
cagtaccttgtggagcacttccatccggaagaacccaggaagttttctcagtgccttcag
ctactcacagacctgcgtgacgtaagtgagcaacatcagcagaggaccattaaaggccag
tacgacgactacacaatggacatcataaaggaccatcccctcatttacgaggccctcgaa
gattccatgtcatgtctgaagactagctga

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