Magallana gigas (Pacific oyster): 105331312
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Entry
105331312 CDS
T03920
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase RPAP2
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
crg01009
]
105331312
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
crg03021
]
105331312
Enzymes [BR:
crg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
105331312
Protein phosphatases and associated proteins [BR:
crg01009
]
HAD phosphatases
Fcp/Scp phosphatases
105331312
Transcription machinery [BR:
crg03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
105331312
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
Herpes_UL55
Motif
Other DBs
NCBI-GeneID:
105331312
NCBI-ProteinID:
XP_011431743
UniProt:
K1QB49
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Position
2:3185769..3190217
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AA seq
602 aa
AA seq
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MDKHLLEAKIRYQVACEEKAHHLVLQLMEPGITEDELVNAGLYLTPNHYQDITEERAISR
ICGYPVCVNQITKSLNQKYHISTKTNRVYDITDRKNFCSNECYKASVYYQKQISTSPLWS
RKEEKPTPIDLLPKEMNRGAMGKEVINQQTEMYREAKRLREEEKKDQSRKEKTKEKESGT
AETEGKERNMVKGDKNFDDLDLDVQNLNLQEEQNGEMCLHEKNKERNSVEKAKKNTTRRK
HEPTVTSSVTSTSDDKQRDKIDRLMALLDKRKHLLGKLVQDERTVTEAPSKPEKEFGDED
TAGECDQPRSQIEAHSEYEENVIIQYPISKVTEVSETKFTPPVCVPEVSKKRKSREKLSN
VEMTYLRMVCEILKEWITPETVRFVRIQSEEEEEGPSTSRTEMEAKMRDLCRRVDHQEAA
LDDLIGEEDTLEDQLPLRSPAPNYESLKKDTREFTRRVQDFFAAGKVIKEKEPDTQGPVY
LPSVDTYDQMLIRRRIVIEQLNKVIPDLLSPLKLTIQDMFAEMKELVMTFRLTSSNIVFK
PVEWSLVGMILLKLLSRRNLHVSCAFLNPSAVQYFSVFLGGIQETMHNVDLYVTGLLQQH
NK
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atggataaacatttgcttgaagccaaaattcgataccaagtggcgtgtgaagagaaggcc
caccatcttgtcctacagctaatggagccagggataaccgaggacgagctggttaatgct
ggtctttatttaactcctaatcactaccaagatataacagaggaaagagcaataagcagg
atatgtggctaccctgtatgtgtgaaccaaattacgaagtcattaaatcaaaagtatcat
atttctacaaaaaccaacagagtatatgacataacagataggaagaatttttgcagcaat
gagtgttataaggcctcagtttattaccaaaaacaaatttccacttcacctttgtggtca
aggaaagaggaaaagcccacaccaattgacctgcttcccaaggagatgaacagaggtgct
atgggaaaagaagtcatcaaccaacaaacagaaatgtacagagaagcaaaacgtttgaga
gaagaagagaaaaaagaccagagtcgaaaagaaaagacaaaagaaaaagaaagtggtact
gctgaaacagaagggaaggaaagaaatatggtgaaaggagataagaactttgatgactta
gatttggatgtccaaaacctcaatttacaggaagaacaaaatggtgaaatgtgtctccat
gagaaaaataaggaaagaaactcagtagaaaaagcaaagaaaaatactaccagaagaaaa
catgaaccaaccgtgacatcctctgtgacatccacctcagatgataagcaaagggataag
atagacagactgatggctctgctagacaagaggaaacatctgttaggtaaattagttcag
gatgaaaggactgttacagaagctccttctaaaccagaaaaagaattcggtgatgaggac
actgctggggaatgtgatcagcctcgctctcaaattgaagctcatagtgaatatgaagaa
aatgtgattatccaatatccaatatccaaagttacagaagtaagtgaaacaaaattcaca
ccacctgtatgtgttccagaagtgtcaaagaagagaaaatcaagagagaaactctccaat
gttgagatgacttacttgagaatggtgtgtgagattttgaaggaatggataactccagag
actgtgaggtttgtgaggatccaaagtgaggaggaggaggagggacccagcacctcgagg
acagagatggaggccaagatgagggatctctgtagacgagtagaccaccaagaggctgct
cttgatgaccttataggggaggaagatactttggaggaccagctgcccctgaggtcacca
gcaccaaactatgagtccctgaagaaggacacacgagagtttacccgaagagtccaagac
ttctttgctgccgggaaggtcattaaagagaaggagccggacacccagggcccagtctac
ctgccctccgtggacacctacgaccagatgctgattaggcggaggatcgtgatagagcag
ctcaacaaagtaatacctgatctcctgtctccactaaagctaactatacaggacatgttt
gcagagatgaaggaactggtgatgacattccgattgaccagcagtaacattgtatttaaa
cctgtggagtggtccctggtgggaatgattctcctcaaactattgtcacggaggaacctg
cacgtgtcctgcgcctttctgaacccctcggctgtccagtatttctccgtcttcctgggt
ggtattcaggagactatgcataatgtagacttgtatgtgactggtctgcttcaacaacac
aataaatga
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