Magallana gigas (Pacific oyster): 105331420
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Entry
105331420 CDS
T03920
Name
(RefSeq) vacuolar protein sorting-associated protein 28 homolog
KO
K12184
ESCRT-I complex subunit VPS28
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
105331420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crg04131
]
105331420
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
crg04147
]
105331420
Membrane trafficking [BR:
crg04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
105331420
Exosome [BR:
crg04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
105331420
Exosomal proteins of other body fluids (saliva and urine)
105331420
Exosomal proteins of colorectal cancer cells
105331420
Exosomal proteins of bladder cancer cells
105331420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS28
Cir_Bir_Yir
SUKH_6
SAM_CEP-1_C
Motif
Other DBs
NCBI-GeneID:
105331420
NCBI-ProteinID:
XP_011431894
UniProt:
K1P327
LinkDB
All DBs
Position
7:complement(30073504..30082154)
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AA seq
220 aa
AA seq
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MFAQIPQGQTDSNNPVLYEEVKLSKSAREREKYDNMAELYAVINTLQSLEKAYIKDAVQP
REYTGACSKLLVQYKAAFKLVQGDFSTVEQFMKKYRLDCSAALERIKEDRPITIKDGISQ
GNTSKAIADIVSLFITVMDTLRLEIRAMDKLQPDLKELMETMNRLSILPRDFEGTQKVKK
WLDIFDEMSASEELDDNQVRQILFDLDSAYNAFNRILHDN
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcacagatcccacagggacaaacagattctaataatcctgttctttatgaggaa
gtgaaactttcaaagtctgccagagaaagagaaaaatatgacaacatggctgaattatac
gctgtgataaacacactacagagtttagagaaagcctacataaaagatgctgttcagccc
agagagtacactggtgcatgctcaaagctcttggtgcaatataaagcagcattcaaactt
gttcagggagatttttcaacagtagaacaattcatgaaaaaatacaggttggactgctct
gctgctctggaaagaataaaggaggatcgaccaatcacaatcaaagatgggattagccaa
ggcaacacaagtaaagctatcgcagatattgtgtccctgtttatcacagtaatggacact
ctaagattagaaatcagagctatggacaagcttcaacctgatctgaaagaattaatggaa
accatgaacagattaagtatattacccagagactttgaaggcactcagaaagtaaaaaaa
tggttggacatatttgatgagatgtctgcctcggaggaactggatgataaccaagtgcga
cagattctgtttgatttggacagtgcttacaatgccttcaaccgcatactgcacgacaac
tga
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