Magallana gigas (Pacific oyster): 105331426
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Entry
105331426 CDS
T03920
Name
(RefSeq) probable global transcription activator SNF2L2 isoform X2
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
105331426
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
crg03021
]
105331426
03036 Chromosome and associated proteins [BR:
crg03036
]
105331426
Transcription machinery [BR:
crg03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
105331426
Chromosome and associated proteins [BR:
crg03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
105331426
Chromatin remodeling factors
BAF complex
105331426
PBAF complex
105331426
GBAF(ncBAF) complex
105331426
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
BRK
Bromodomain
HSA
QLQ
ResIII
DEAD
HDA2-3
Motif
Other DBs
NCBI-GeneID:
105331426
NCBI-ProteinID:
XP_034312553
UniProt:
A0A8W8JRN5
LinkDB
All DBs
Position
7:complement(30156529..30183693)
Genome browser
AA seq
1665 aa
AA seq
DB search
MASGDDGGMMRATPPGPAYPPQQQQQENVQKIHKAMNQMEEKGMQDDPRYAQLAAMADMA
RNPGMPSQHHSMGHQRMGDYQGNMMQGPPHSMSGGSQSMGGGSQNMGGSQPNMMQGMGGP
QHRMGGMQPMPHQGQNMSQGMPPQGQGMGPQGPNMGQGMPPQGQGMGQGMPPQGQNMGQG
MPPQGQNMGQGMPPQGQGMGQGMPSNNPAMNNPMMSGSNAGGNYNPMGGQGMHGNSSMAG
QSNMSGSQPMNTGMGSNSPHPMPQGGTMPHKMGGSMPPMGGPNRPDQQGQPNMPNQMGGP
GGSQGSGRQTAFNQQQLSQLRAQIMAYKLLSRNQPIPDNIRMAIEGKRGPQMQRPPDPSG
RQPPGQVPNSQAPHNQAFNSGFSGGQMTQAPPNTSAGQLPQRPPGQQQGGSQAGPHGAAH
PPSSQSVMQQKQSKIAPVAKPQGLNPIDLLNERENRIAARISSRIKELQDLPATMPEDMR
TKAMIELRALRLLNFQRQLRSEVVSCMRKDTTLETALNTKAYKRNKRHSLREARVTEKLE
KQQKIEQERKRRAKHQEYLNAVLQHAKEFKEFHRNVTNKVGKLNKAMMVHHANTEREQKK
EQERLEKERMRRLMEEDEEGYRKLIDQKKDKRLAYLLAQTDEYISNLMTLVAQHKEDLKK
KKQKRRKKKREDKAEDGDSNMSEMRVSVIETSTGKVLSGDDAPLTSQLETWLELNPGYEV
APRDDGEESGSGDEEEEEPEQEESSLLAKPEKMLPKLTSPDDIDEGLAKEVITQASQEVD
DEYHRSATKAEEKSYYSVAHTVHEHVTEQASIMVNGKLKEYQIKGLEWLVSLYNNHLNGI
LADEMGLGKTIQTIGLITYLMERKKVNGPFLIIVPLSTLSNWVLEFEKWAPSVVKIAYKG
SPTTRRLLVPQLKAAKFNVLLTTYEYIIKDKAALSKLRWRYMIIDEGHRMKNHHCKLTQV
LNTHYCAPHRLLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFAMTGEKVEL
NQEETLLIIRRLHKVLRPFLLRRLKKEVESQLPDKVEYVIKCEMSALQRCVYRHMQARGI
LLTDGSEKDKKGRGGSKAMMNTIMQLRKICNHPFIFQHLEEAIAEHQGGTGASISGPDLY
RSSGKFEFLDRVLPKLKTLNHRVLLFCQMTSLMSILEDYFLYRGYRYLRLDGTTKSEDRG
QLLELFNQKDSPYFLFLLSTRAGGLGLNLQAADTVIIYDSDWNPHQDLQAQDRAHRIGQK
NEVRVLRLMTVNSVEEKILAAARFKLNVDEKVIQAGMFDQKSRGYERQQLLQSILENENE
EVEEEDEVPDDETINQMLARSEDEFDLYQKMDIERRREEARNPNRKPRLIEEAELPTWIL
KDEKEVERLTYEEEEDKLFGRGSRQRKEVDYSDSLTEKQWIKAIEEGNLDEVETVKQKSK
KPKKRKPEKDEESKPKKKRGRPPVEKLPPNPRKLTSIMKKILDVVLNYKDRDDRVLSEAF
FQLPSKKDLPEYYEIIAKPVDFKKIKQRIRDHRYRSLDDLETDVMLLCENAQSYNIEGSL
IYEDSIVLKSVFTSARERLEKEGVTYSDDNSSSNEEDEGEDEDGKGEDEEEEEEDEDGAS
SSKKHKKDKSKKKKDKAESSKKRKSRGKAKPVISDEDDETDEDYE
NT seq
4998 nt
NT seq
+upstream
nt +downstream
nt
atggcctcaggggatgacggggggatgatgcgggccactcccccaggtccagcataccct
ccccagcaacagcagcaagaaaacgtacagaagatacacaaggctatgaatcagatggaa
gagaagggaatgcaagatgacccaaggtatgcacagttagcagccatggctgatatggcc
agaaacccagggatgccaagccagcaccatagtatgggccaccagagaatgggagactac
cagggcaacatgatgcaaggcccaccccatagcatgagtggtggatctcaaagcatggga
ggagggtcacaaaacatgggcggcagccaaccaaatatgatgcaaggaatgggtggtcct
caacatagaatgggaggaatgcaaccaatgccacaccagggacagaatatgagccaagga
atgccacctcaaggccaaggaatgggtccacagggaccaaatatgggtcaaggaatgcca
ccacagggtcaaggaatgggtcaagggatgccacctcaaggacagaacatgggacaagga
atgccaccgcaaggacagaacatggggcaagggatgcctccacagggccagggcatgggt
cagggaatgcccagtaataaccctgccatgaataatccaatgatgtctggatcaaacgct
ggaggtaattacaatcccatgggaggacaaggaatgcatggaaattccagtatggctggc
caaagtaatatgtcaggatctcagccaatgaacacaggaatggggtcaaactctccacat
cctatgccacagggagggaccatgccacacaagatgggaggaagcatgccaccaatgggg
ggtcctaacaggccagatcagcaaggacaaccaaacatgccaaatcaaatgggtggacct
ggaggatcccaaggttcaggaagacaaactgccttcaatcaacagcagctgtctcagctt
agagctcagataatggcatacaaactactgtccagaaaccaacccatcccagataacata
aggatggcaatagaggggaaacgagggcctcaaatgcagagacccccagatccaagtggt
agacaaccaccagggcaggtcccaaactctcaagctcctcacaaccaggcctttaactca
ggcttctctgggggacaaatgacacaagccccacccaacaccagcgcagggcagctcccc
cagagaccacctggtcagcagcaaggtggttctcaagcaggcccacatggggccgctcat
ccgccatcctctcagtccgtcatgcagcagaaacagagcaagattgctcctgttgccaag
ccacagggacttaatcctattgacctactgaatgaaagggaaaacagaattgcagctaga
atttctagtagaattaaggaactgcaagacctgcctgctacaatgccagaagatatgaga
actaaagctatgattgaactgagggccttgaggcttctaaacttccagagacagctaagg
agtgaggttgtttcatgcatgagaaaggatactacactagaaactgcactgaatactaaa
gcctacaagagaaacaagagacattccctacgtgaagccagagtcactgagaaattagag
aaacagcagaaaattgaacaggagagaaagaggagagctaaacaccaggaatatctgaat
gctgttctgcaacatgctaaggaattcaaagaattccatcgcaacgttaccaataaggtt
ggaaaactcaacaaagccatgatggttcatcatgccaacacagaaagggaacagaaaaaa
gaacaagaaagattagagaaagagcgtatgaggagacttatggaggaagatgaagaaggt
tacaggaagttgattgaccagaagaaggacaagcgtcttgcctatctgctggcccagaca
gacgagtatatatctaacctgatgacactggtggctcagcacaaagaggacctgaaaaaa
aagaaacagaagcgtcgcaagaagaagagggaagataaggcagaggatggggattctaac
atgagtgagatgagagtgtctgttattgagacatccaccggcaaagtactctcaggagat
gatgccccattgacaagccaactggaaacctggttggaactgaatcctggatatgaggta
gctcctcgtgacgatggagaagaatcgggatctggagacgaggaagaggaagagcctgaa
caggaagaatcttctttacttgcaaagccagagaagatgctgcccaagctcacaagtcct
gatgacattgatgaaggtttggccaaggaagtcattacacaagcttcccaagaagtagat
gatgagtaccatcgcagtgccaccaaggctgaggagaagagctactactctgtggctcac
actgtgcatgaacacgtcacagaacaggcttctatcatggtcaatggcaaactgaaggag
taccagataaaaggattggaatggttggtgtccttgtataacaaccatttgaatggaatc
ctggccgatgaaatgggtctcgggaagaccattcagaccattggactgattacttatctg
atggaacggaaaaaagtcaatggtcctttcttgatcattgtgcccctgtcgacattatca
aattgggtattggagtttgaaaaatgggccccatctgtagttaagattgcttacaaagga
tcgcctacaactagacgcttgctggtgccacagttaaaggctgccaagtttaatgtacta
cttacaacatacgagtacatcattaaggacaaagctgctttgtctaagttgaggtggaga
tacatgatcattgatgagggacatcgtatgaagaatcaccactgtaaactgacacaggtg
ttgaacacccattactgcgcaccccaccgcctccttctgactggaacacctttacagaac
aaattgccagagttgtgggccctgttgaactttttgctaccaagtatcttcaagtcctgc
tctacatttgagcagtggttcaatgctccgtttgccatgactggagaaaaggttgagctg
aatcaggaagaaaccttgctgattatccgacgtttgcacaaggtcttgagacctttctta
ctccgtcgtcttaagaaagaggtggagtcacagcttcctgataaggtggagtatgtgatc
aagtgtgaaatgtctgccctccagagatgtgtgtatagacatatgcaggccagaggaatt
ctgcttactgatgggtcagaaaaagataagaagggccgtggtggatctaaggccatgatg
aacacgatcatgcagctgaggaagatttgtaatcatcctttcattttccaacatctggag
gaagccattgcagaacatcaaggaggcactggtgcctctatcagtggacctgacttgtat
cgaagctctggcaagtttgagttcttggaccgtgtactgcccaagctgaagactctaaac
caccgtgtcttgcttttctgtcagatgacatcactgatgagtatactggaggactatttc
ttgtacagaggatatagatacctgcgtctggatggaacaacaaaatctgaagatcgtgga
caactgctagagttgttcaaccagaaggattccccttacttcttattcttattgagtacc
agggctgggggcttaggtctgaatctgcaggctgcagacaccgtcatcatttatgattca
gattggaatcctcatcaggatctccaagctcaagacagagctcacagaattggacagaag
aacgaggtcagagtgctgcgtctgatgactgtgaactcagtggaggagaagatcctggca
gccgctcgcttcaaactgaatgtcgatgaaaaggtcattcaggccggtatgtttgaccag
aagtcccggggctatgagcggcagcagcttctacagtccattctggaaaatgaaaatgag
gaagtggaggaagaggatgaagttcctgatgatgagactatcaatcagatgttggcaaga
tctgaggacgagtttgacctttaccagaaaatggatattgagagaagaagagaagaggcc
agaaatccaaaccgaaagccgcgcttgattgaggaagccgagttgccaacatggattctg
aaagatgaaaaggaggtcgaaaggttgacttacgaagaggaggaggataaattatttgga
agaggatcgcgacagagaaaggaggttgattattctgactctcttacagagaaacaatgg
atcaaggctattgaggaaggcaatttagatgaagttgaaaccgtaaagcagaaatcaaag
aaacccaaaaagagaaagccagagaaagatgaggaatcaaagcccaaaaagaagcgaggt
cgtcccccagtggagaaactcccacccaacccccgcaagctgacctctataatgaagaag
atactggatgttgtactcaactacaaagacagagatgacagagtcctgagtgaagcattc
ttccagctgccatcaaagaaagatttgccagagtactatgagatcattgcaaagcctgtg
gattttaagaaaatcaagcaaagaattcgagatcacagatatcgcagtctggacgacctg
gagacagacgtaatgcttctgtgtgagaatgctcagtcttacaacattgagggatcactg
atctatgaggactccattgttttgaaatcagtgtttactagtgccagagagaggctggag
aaggaaggcgtgacctactcagatgataacagcagcagtaatgaggaagatgagggagag
gatgaggatggcaagggagaggatgaggaggaggaagaggaagatgaggatggtgcatct
tcaagcaaaaaacacaaaaaagacaagtccaagaagaaaaaagataaggcagagagttct
aaaaagagaaaatctcgtggcaaggctaagcccgtaatcagtgatgaagatgatgaaaca
gatgaggactatgaatga
DBGET
integrated database retrieval system
