Magallana gigas (Pacific oyster): 105331540
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Entry
105331540 CDS
T03920
Name
(RefSeq) intraflagellar transport protein 52 homolog
KO
K19681
intraflagellar transport protein 52
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
crg03037
]
105331540
Cilium and associated proteins [BR:
crg03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
105331540
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Gene cluster
GFIT
Motif
Pfam:
IFT52_GIFT
IFT52_central
Itf52_C
ABC_transp_aux
OST48_N
DUF4350
DUF2194
Motif
Other DBs
NCBI-GeneID:
105331540
NCBI-ProteinID:
XP_011432075
UniProt:
A0A8W8L0Q0
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Position
7:complement(37734877..37741875)
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AA seq
443 aa
AA seq
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MAPTTEGMDEKAQRNVIVFNQSKNEIFSPGNGLKTLNRKLRSTWKIQTNKAEITPETLSS
VSIFVICGSREKYTGSELESIKRYIDGGGSVLVLLGEGGETRFETNINFLLEEYGIMINN
DAVVRTSYYKYFHPKEALIANGVLNRAVSQAAGKTFSVEEDGNNAQALSFLYPYGATLNV
MKPSTALLSTGSVSFPLNRPVCALYENRNHGKLVVLGSCHMFSDQYIDKEENSKVLDVLI
RTLTSDEIKLNPIDAEDPEISDYNMLPDIAKLAGQLKTCLQESDDVPRDITMLFDNSLFK
LDTSLVPNAIKAFEQLNVKHESLTLITPQFETPLPPLQPAVFPPQFRELEPPKLDLFDLD
EQFSSEKVRIAQQTNKCSDDDLEYYVRECGDILGVTSNLPQDSRDAKHILEYIFTHVVEF
KKLNQEQDYDTTQFGGGGGYGQY
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgacgacagagggtatggatgaaaaagcacagagaaatgttatcgtgttcaat
cagtcaaagaatgagatcttctctcccggtaatggtctgaaaacgctaaaccgaaagtta
cgttcaacatggaagattcaaactaacaaagcagaaataactccagagactctatcctct
gtcagcatatttgtaatatgtggcagcagagaaaagtacacaggttcagagttggaatca
atcaagcgttacattgatggaggaggtagtgtgttggttctccttggtgagggaggagaa
acaagattcgaaaccaacatcaactttctgctggaagagtatggaattatgataaataat
gatgcagtagtgagaacctcatattacaaatattttcatccaaaagaggcattgatagca
aatggtgtattaaatagagcagtaagtcaggctgctgggaagacattttcagttgaggaa
gatggaaacaatgctcaggcattgtccttcttgtacccctatggagccacattgaatgtg
atgaagccatccactgctctgctgtcaactggatctgtgtcctttcctctcaacagacca
gtctgtgccctctatgaaaacaggaaccacggcaaattggtggtgttaggatcatgtcac
atgttcagtgatcagtacatagacaaagaggaaaacagcaaagttctcgatgtacttatc
agaactttgacatcagatgaaattaaactaaacccaattgatgctgaggacccagaaatc
tctgattacaacatgctgccagacatagctaagctagctggccagctgaagacctgcctc
caggagagtgacgatgttccccgagacatcaccatgctgtttgacaactccctgttcaag
ctcgacaccagcctggtccctaatgctatcaaagcttttgagcagctgaatgtcaaacac
gagtccctgactcttatcacccctcagtttgagactcctttaccccccttacaaccagcg
gtgtttcctccccagttccgagaactggaaccaccaaagttagatctgtttgatctggat
gagcagttctcttcagagaaagtcaggatagcccaacagaccaacaaatgctcagatgat
gaccttgagtactatgttcgggaatgtggagacattcttggtgttacatcaaacttacct
caggattcgagggatgcaaaacatatcctagaatacatttttacccatgttgtggaattc
aagaagttgaatcaggaacaagattatgataccactcagtttggaggcggaggaggatat
ggccaatattaa
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