Magallana gigas (Pacific oyster): 105331590
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Entry
105331590 CDS
T03920
Name
(RefSeq) RNA-binding protein 39 isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
crg03041
]
105331590
Spliceosome [BR:
crg03041
]
Common components
Common spliceosomal components
General mRNP proteins
105331590
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_7
RBD_DEAH11
PRP38_assoc
Nup35_RRM_2
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
105331590
NCBI-ProteinID:
XP_011432151
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Position
3:complement(5763756..5774124)
Genome browser
AA seq
547 aa
AA seq
DB search
MADDLDVEAMLEAPYRKEDDGRGDADRDREKRKKRSGSRDKGRDKDRDRDRDRDRERDRD
RRRSRSRDRHRDGDKERHRGHDRHRGRDRDRERREKRRSKSREKRRRSRSKSKERKKSRS
PERERRQRSNSKSPMRYTRQPGPELTPEERDARTVFCMQLSARIRPRDLEEFFSSVGKVR
DVRLIMDNKTRRSKGISYVEFQDTDSVPLAIGLTNQKLLGVPIIVQHSQAEKNRVGNPTS
ILTKGNIGPMRLYVGSLHFNITEEMLRGIFEPFGKIDDIKLIRDHETNRSQGYGFITFHD
SEDAKKALEQLNGFELAGRPMKVGHVTERQGEIQGASMLDSDEMDRAGIDLGATGRLQLM
AKLAEGTGFQIPEYAVSALNITQQAPGVASAAPPAGPAPNVSAILGSQAAGQDSTAPPIA
TQCFMLSNMFDPNAESRSSWDQEIRDDVIEECNKHGGVLHLYVDKASPQGNVYVKCPTIS
AAVASVRALHGRYFGGKMITAAYVPLPNYHSLFPDAVRANQLLLPSTQALQAGFPSTMFP
AMQPVIR
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgatttggacgtagaagctatgttggaggctccttacaggaaggaggatgac
ggaagaggagatgctgatagagatagagagaagagaaaaaagagaagtggaagcagagac
aagggtcgtgacaaggacagagacagggaccgagatagggatcgagaacgtgacagggat
cgtcgcaggagcagaagtcgagaccgtcatagggatggagacaaagaaaggcataggggt
catgatcgacatagagggcgtgaccgagacagagaacgacgagaaaaacggcgtagtaaa
agccgagaaaaacgcaggaggagtcgaagtaaatcaaaagaacgcaagaaaagtcgatcc
ccagaaagagaaagaagacagagaagtaacagcaaaagccccatgagatacactaggcag
ccaggtcctgagttaactccggaagaaagagatgcaaggactgttttctgtatgcagctc
tctgctagaattcgcccaagagaccttgaagaattcttctcctctgtgggaaaggtcaga
gatgtgagactaatcatggacaataaaacaaggaggtcaaaaggcatttcttatgtagaa
ttccaggacactgattctgtaccattagccattggacttactaatcagaaattactgggt
gttcctatcatagtacagcactctcaggctgagaaaaaccgagtaggaaaccctacaagc
atcttaacaaaaggaaatattggacctatgaggctgtatgtgggttctttacacttcaac
ataacagaagaaatgctcaggggaatatttgagccatttggaaagattgacgacattaaa
ttgatcagagaccatgaaacaaacagatcacaaggatatggttttataacattccatgat
tcggaagatgcaaagaaagctttagagcagctcaatgggtttgagctggctggccgtcca
atgaaagtaggccatgtgacggagagacagggagagatccagggggcttccatgttggac
agtgatgagatggaccgggcagggatagacttgggagccactggtcgcttgcagctgatg
gctaaattagcagaaggcacaggtttccagatacctgagtatgctgtgtcagcgctgaac
ataactcagcaggcaccaggagttgctagtgctgcacctcctgctggaccagcccctaat
gtgtcggctatactgggtagtcaggctgctggacaagatagcactgcccctccaatagct
acccaatgcttcatgttgtccaacatgtttgatcctaatgcagagtctcggtcaagctgg
gatcaggaaatcagggatgatgtgatagaagaatgtaacaagcatggtggagtcctacat
ctgtatgtagacaaggcttcaccccaaggaaacgtctatgtcaagtgtcccacgatatca
gcagctgttgcctccgttagagcacttcatgggaggtattttggaggcaaaatgattaca
gcggcctatgtacccctcccaaactaccactccctgttccctgacgcagtgagagccaat
cagctgctgcttccgtcgacccaggcgctacaggccggattccccagcaccatgttcccc
gccatgcagcctgtcatcagatag
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