Magallana gigas (Pacific oyster): 105331767
Help
Entry
105331767 CDS
T03920
Name
(RefSeq) ran GTPase-activating protein 1
KO
K14319
Ran GTPase-activating protein 1
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105331767
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crg03019
]
105331767
Messenger RNA biogenesis [BR:
crg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
105331767
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RanGAP1_C
LRR_NLRC3
LRR_6
LRR_TMOD-LMOD
LRR_CARMIL
LRR_NLRC4
LRR_8
LRR_SKP2
Protoglobin
EIF_2_alpha
Motif
Other DBs
NCBI-GeneID:
105331767
NCBI-ProteinID:
XP_034301505
LinkDB
All DBs
Position
2
Genome browser
AA seq
569 aa
AA seq
DB search
MTSKDISSVTDQLAKTVVDEQYELSFKGKGLKLDTAKDAKEIVDEIKKCKVMTALRMEGN
TLGVDAAKAIAETLETRKEFQHAHWSDMFTGRLKSEIPKALEFLGGAIMKAGAGLVVLDL
SDNAFGPNGIVGLVALLKSSSCYTLQELRLNNNGLGITGGKVLAECLTECHQNSVKAGKP
LELKVFVSGRNRLENPGATALAAVFKALGSLEEVAMPQNGIYAEGITALAEAFAENKNLR
VMNLSDNTFTQKGAKNMAKVLPKLQNLEVINYGDCLVRTEGAIAITEALKEGHQKLKELN
LSGSEIHKRGAIAVVENMKNKPNFKKLDLNCNMFGESGIEEIKEAMKNNGKLDILASLSD
DEGSEEEEVDEGDDQGEEEDVGQDDVEGEEVNDPELQVKGKSISPNKKVTAKDFLAFPSP
SKLLQLGSGRAQALKEELGADVNDLEKAVQAFMKISSVVTMEDTKAKEAACDCADQIIEE
AVKCNRENDAVLLANTILVYIGVLKGEDKSYKPPNNVTGPLLVLEHIVRQHYFPKFSREM
LQAFCSKPHPLLDSTPQARHKLLQTLYAF
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgacttcgaaggatatttcaagtgttacagaccaattggccaagacagtagtagatgaa
caatatgagcttagttttaaaggaaaagggttgaaattagacactgcaaaggatgcaaaa
gaaattgttgatgaaataaagaaatgcaaagtaatgacagcattacggatggagggaaac
acccttggagtagatgcagcaaaagccattgctgaaacattggagacacgcaaagagttt
cagcatgctcattggagtgatatgtttactggaagactgaaatcagaaataccaaaggct
ttggagtttttgggaggggccataatgaaggctggagcaggattggtagtcctggacctg
agtgacaatgcatttggtcctaatggaattgtaggactagtggctctactgaagagctcc
agctgctatacgctacaggagctgcgactcaacaacaatggattgggtataacaggagga
aaggtgttggcagaatgtttaacagaatgtcatcagaatagtgtgaaggctggtaaacct
ctggaactgaaagtctttgtgtctggacgaaatcgactggaaaatccaggagcaacagca
ctagctgctgtgtttaaagccttgggttctctagaagaggtggctatgccccaaaatggt
atatatgccgaaggaattacagccctagcagaggctttcgctgaaaataaaaatctaaga
gtcatgaacctaagtgacaacacattcacacaaaaaggggccaaaaatatggcaaaagtc
ttaccaaagttacagaatttagaggtgataaattatggtgattgtttggtgaggacagaa
ggggctattgccattactgaggccctcaaagagggacaccagaagctcaaagagttgaat
ttgtcaggaagtgagatacacaaaagaggcgcaatagcagttgtggaaaacatgaaaaat
aaaccaaactttaaaaaacttgacctcaattgtaacatgtttggggaatcaggtatagaa
gaaatcaaggaagcaatgaagaataatggtaaactggacatccttgcctcacttagtgat
gacgaaggatcagaagaggaagaggtagatgagggtgatgaccaaggcgaggaggaggat
gtaggacaagatgatgttgaaggggaagaggtcaatgaccctgaactccaggtcaagggc
aaatccatttctccaaacaaaaaggttactgcaaaagacttccttgcgtttccttccccg
agtaaactactacagctaggaagtggtcgggcacaggcactgaaggaggaactcggagct
gatgtgaatgacttagaaaaggctgtccaggcatttatgaagatatctagtgtggtaaca
atggaggatactaaagctaaagaagcagcttgtgactgtgcagaccaaataattgaagaa
gctgtcaaatgtaatagagaaaacgatgcagtcctccttgcaaatacaatattggtgtat
ataggtgtattaaagggtgaagataaatcatataagccacccaacaacgtaactggccca
ctgttggtgctggaacatattgtacgacagcattacttccccaagttctccagagaaatg
ttgcaagccttctgtagcaaaccacatccacttcttgattccacgccacaagcaagacat
aaactgttacagacgctgtatgcattttaa
DBGET
integrated database retrieval system