Crassostrea gigas (Pacific oyster): 105331924
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Entry
105331924 CDS
T03920
Name
(RefSeq) leucine-rich repeat-containing protein 15
KO
K18808
toll-like receptor 13
Organism
crg
Crassostrea gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
crg04054
]
105331924
Pattern recognition receptors [BR:
crg04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
105331924
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_9
TIR
TIR_2
LRRNT
LRRCT_2
CRIM1_C
Motif
Other DBs
NCBI-GeneID:
105331924
NCBI-ProteinID:
XP_019924334
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Position
LG6:complement(15860635..15866099)
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AA seq
881 aa
AA seq
DB search
MKMHTTPVLLVGICLLQAGVAWADTCPAYCFCNKLLTSVNCEGKRLMKIPTDLPKTVEKL
YLQHNEIADLEPNSLCGLSELQELYLQNNKLSFIKSLTFTGTCVPNLKVIRLDNNRISSL
EENAFFNMTNLNITYFTNNVITHINPRSFVECFKMSFLHLGQNYLDHIPAISFLTGLQQL
SIQGNKVKNATFPTSYENCTLLSTIGLSTNFIENLTKETFQSLQNCPVRKLELSRNKITD
ISKEAFLPLTKLVSLTISQNHLTAPKLKIGLEGLKSSSLSSLNIARLQLGGQLPSSTFAL
LNGTVLKQLLMSNNKINQLPSRAFATLKRLEQIDLKGCKIQTIANDTFAGLHFLTNLNLA
DNYLDKVPTNLPSSLNILYLNGNQIIALGENSFVNLVSLKNLYLGANKISEVNKLAFNGL
VSLQKLHLVSNSISSLAAELFAPFGRLISLELNKNNLKTVQNSPDIFSSMTSLLYLSLAD
NGCSIMPLSSFKHLQSLKYLLLDGNNLGDLIGSDNSGTLFAGLHKLETLSLSKNFLHNLP
TSMFRDLSSLKTLTMQGNRISGWNNGLFKQTSALKTLDLGDNSISLVNSTSLEDLSQNLN
FQMLNLSNNPFACTCDLRWFRDWVNQTKVNIANVENYVCNSPDAWKGKPFLSFDRTKINC
VWFNLYFVIGVSVASAVAMLIICVFIYRKRWWILYRCYRLKNSCMAPRSRAGYQPINSEH
GWKYDAYLSYADEDYQWILENLLPGIDSGELSPGETFNGEFRLYFNDRDSVPGSSMISNI
SDNIEMSRKVIIVLTKKYLSSAQHTFEIDLAVMLKLKDIIDDIIVINVLGVPYQSIPKSL
QRKVSRDEFLLWEEEVNARRVFKQRLIEALTSKRKTREVIV
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgcatactactccagttctactagtcggcatatgcctgttgcaagctggtgtt
gcatgggcagatacatgtcccgcgtactgcttttgcaataaattactcacgtcggtgaat
tgcgaaggcaaaaggttgatgaaaatacctacggacctgccaaaaacggtcgaaaaattg
tatctgcagcacaacgaaattgcggatctagagccgaactctctctgtgggctttccgaa
ttgcaggaactttatctacagaataacaaactttcctttataaagagtttgacatttacc
ggaacatgtgtaccgaatttaaaagtaatacgacttgacaataatcgcatcagttcgttg
gaggaaaatgcatttttcaacatgacaaacctcaatattacatatttcactaataacgtg
atcacacatattaatccgcgttcatttgttgaatgttttaagatgtctttcttgcattta
ggacaaaactatttagatcacattccagcgatatcatttctaactggactacagcagctc
agcatacaaggaaacaaagtaaagaacgcaacatttccaactagctatgaaaactgcaca
ctgctgtcaacaattggtcttagcacaaatttcatagaaaatctcactaaggaaactttt
cagagtctgcaaaattgtcccgtcagaaagttggagttatcgagaaataaaataactgac
atttccaaggaagcttttctgcctttaacaaaacttgtgtctcttacaatcagccaaaat
catttaacggctcctaaacttaaaattggattagaaggtctcaaatcctcctcgcttagc
tcacttaatatagcaagacttcaacttggaggacaattgccctcttccacatttgcactt
cttaatggaacagtactgaagcaattgcttatgagtaataacaaaatcaatcaacttcct
agtcgtgcatttgccactttaaaaaggctagagcagatcgacttgaagggctgcaagatt
cagacaattgccaacgacacttttgcaggactccactttctcaccaatttgaaccttgca
gacaactatttggacaaagttcccacaaatcttccatcatcgctgaatatactatatctc
aatggaaatcaaatcattgctcttggtgaaaattcattcgtgaatctagtatcgttgaaa
aacctttacctgggtgccaacaaaatttctgaggtaaacaaattggctttcaatggtttg
gtcagcctacaaaaactgcatttggtttccaatagtataagtagtctagccgcagaactg
tttgctccattcggaaggctgatttccctcgaactaaataagaacaatttgaaaacagtt
caaaattcaccagacattttctcatcaatgacgtccttgttgtatctttcattggctgat
aacggctgtagtataatgccattgtcgtcattcaaacacttgcaatcactgaaatacttg
ttacttgatggcaataatcttggagatctaattggaagtgacaattctgggactttgttt
gctggattacacaaactagaaacacttagtctttcaaagaatttcctccacaacctacca
acatcgatgtttagagatcttagctccttaaaaacattaacaatgcagggcaatagaatt
tctgggtggaacaatggtttattcaaacaaacttctgcgctcaaaaccttagatcttggt
gacaattctatatcgttggtgaattcaacctccttggaagatctttcacaaaacctaaat
tttcagatgctgaacctgagcaacaatccatttgcatgcacttgcgaccttcgatggttc
cgagattgggtaaaccaaaccaaggtgaatattgcaaatgtcgaaaattacgtgtgcaat
tccccagatgcatggaaggggaaacctttcttgtcatttgatcggactaaaattaactgt
gtttggtttaacctgtattttgtgatcggggttagcgtggcatctgctgttgctatgctt
atcatctgtgtcttcatctatagaaagcgatggtggattctctatcggtgttaccgtctg
aaaaactcctgcatggctccacgaagcagagctggttatcagccaattaatagtgaacat
ggatggaaatatgacgcctatctatcgtatgctgatgaagattaccagtggatcctcgaa
aacttactcccaggtatagactccggagagctgtcaccgggagaaacatttaatggggag
tttaggttgtattttaacgacagggactctgttcctggaagcagtatgatttccaacatc
tcagacaacattgaaatgagcagaaaagtcatcatcgtcttgacgaagaaatatctttct
agtgctcagcacacatttgaaattgatcttgctgttatgttgaaattaaaagacatcatt
gatgatatcattgtgattaatgttcttggtgttccatatcaatccattccaaaatcgctg
caaaggaaagtgtctcgagacgaatttctactatgggaagaggaagtcaatgccagaaga
gtatttaaacagagattaatagaagcactgacgagtaaacggaaaacgagggaagtcatt
gtttaa
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