Magallana gigas (Pacific oyster): 105331958
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Entry
105331958 CDS
T03920
Name
(RefSeq) RNA-binding protein 5
KO
K13094
RNA-binding protein 5/10
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
crg03041
]
105331958
Spliceosome [BR:
crg03041
]
Complex A
Other components
Complex A specific factors
105331958
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
G-patch
OCRE
G-patch_2
Zn_ribbon_RanBP
DUF7066
zf-ChsH2
Motif
Other DBs
NCBI-GeneID:
105331958
NCBI-ProteinID:
XP_011432654
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All DBs
Position
4:complement(49759804..49770513)
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AA seq
862 aa
AA seq
DB search
MELHPFALQQGQFGFHQGNIGIINMNPMQFNNGGEEYEEGEYINENYGYEEGGYDLLPGH
LGQKQNMDNQADYDRERDRDRSRRRDRDRDGRRRDERRSSHDRDRNRRRDRDRDRDRDRG
RDRRDRERSSHRSSDDDRDSDSRDSYHRSDQREDRAGEKWMTDTPTNTILLRNLPPQVEE
KDIRAELMMFGAPVRDVRLMRRSTGTSRGFAFVEFQSVADAQRWMDHYQGVLNIQNHYSA
TMHYSTPKTLDKGPIHKTDWTCSKCGVHNFKRRDHCFKCTLSREESERKQEGDGFDQVGT
NPCNTLILRGLDALTTEDNILHVMSQITTFPLKNVQIIRDDATNTSKGFGFMELNTVNEA
SQLMDQFNNHVPLEVDGKQLLVNYAKNTFSTVMATISAAASQLGTAQGQGWAYNQANQQG
FYDQNYYQGTDYNQAAYNQYYEGTQTDSTNAAAAVAQAAINKSLAAKATPQQKKGQTKEP
PQAPTQEQIAAQDYPTYPPPDVSTYQYEETSGYYYDPMTTLYYDANSQYYYNAQTGQFLY
WDAEKSTYLPAPTGHGATPASEGEGTSEKKNKKEEKKEKNKMAKKIAKDMEKWAQTMNKQ
KEAMKGFNAALKAMNGPNERKESATADAGYAILEKSAKGGLEDKKLMPPPTVATNSPSQA
SGGGKPGLVASYGGDSDEEEPGDDDSGILDESRLTDWNKLACLLCKRQFQTKEILIKHQQ
MSDLHKQNLENLVKMKAAAGGNDSGQFQYRDRAKERRDKYGIPPPPEPRHKRPDLPVPYE
QPTKSGIGGDNIGNKLLQKMGWKAGKGLGKSGQGIVNPIEAERRAQAAGLGMRGANYGTT
AGDDYRESVKKTMFARYHEMDS
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atggaacttcacccatttgcccttcagcagggccaatttggatttcaccaaggcaatata
ggaataattaacatgaatcccatgcagttcaacaacggcggggaggaatatgaagaagga
gaatacatcaatgagaactacggctatgaggaaggagggtatgaccttttacctggtcat
ctgggccagaaacagaacatggacaaccaggcggactatgatagagagagggacagagat
agatcaagaaggcgtgatagagacagggatggacgccgaagagatgagaggaggtcgtct
cacgatcgtgacagaaatcgtagacgagaccgggatcgtgacagggaccgagatagagga
agggatagaagagacagggagagaagttcacacagatcatcagatgatgacagggattca
gacagtcgtgatagctatcacaggtctgatcagagagaggatagagcgggggagaaatgg
atgacagacacacccacaaacaccatcctgctccgaaatctgccgccacaggtggaggaa
aaagacattcgagcagaactgatgatgtttggggcacctgtgcgcgatgtccgtctcatg
agaagaagtacaggtacctcacggggctttgcatttgtggagtttcagagtgtggcagat
gcccagcggtggatggatcattatcagggcgtgcttaacatccagaaccattactcagcc
accatgcactacagcaccccaaagacgcttgacaagggccccatccacaagacagactgg
acctgtagcaagtgtggcgtccataatttcaagagaagggatcactgtttcaagtgcact
ttgtcgcgagaagagtctgagaggaaacaggaaggggatggctttgaccaggtcggcaca
aatccatgcaataccttaattttgcgaggattagatgctttgacaactgaggacaacatc
ttgcacgtaatgagtcagatcaccactttccccctgaagaatgttcagatcatccgtgat
gatgccacaaacacgtccaaggggttcgggttcatggagctgaacactgtcaatgaggcg
tctcagctgatggaccagttcaataaccacgttccacttgaagtggatggcaaacagctg
ctggtgaattatgccaaaaatacattctccactgtgatggccacaataagtgctgctgca
agccagttgggtacagctcagggccagggctgggcttacaaccaagccaaccaacagggt
ttctatgatcagaactattatcagggtacagactacaaccaggcagcctacaatcaatac
tacgagggcacgcagacggattctacaaatgcagcagcagctgtagcccaggcagccatc
aataaatccctggcagccaaggctactccacaacagaaaaagggccagaccaaagaaccg
cctcaggcaccaactcaagagcagattgctgcccaggattacccaacatatcctccccct
gacgtgtctacataccagtacgaggaaacctctgggtactactatgatcccatgacaacc
ttgtactatgacgccaactcccagtactattacaatgctcagacaggccaattcctgtac
tgggatgcagagaagtcaacctacttaccagcccccactgggcatggagccaccccagca
agcgagggggagggaacatcagagaagaagaataaaaaggaggaaaagaaggagaagaat
aagatggcaaagaaaatagctaaagacatggaaaaatgggctcagaccatgaataagcaa
aaagaggcaatgaaaggctttaatgcagcactgaaagctatgaatggacctaatgaaagg
aaagaatcagccactgctgatgcaggctatgccattctggagaaaagtgctaagggaggt
ttagaggacaagaagttgatgcctccaccaacagtagctactaactcgcccagtcaggcg
tcgggcggtggtaagcccggtctggtggcatcctacggtggtgacagcgatgaggaggag
cctggtgatgacgactctggaatcctggacgagagccgactgacggactggaacaagctg
gcctgtctgctgtgtaagagacagttccagaccaaggagatcctcatcaagcaccagcag
atgtctgacctccacaagcaaaatttagaaaatcttgtgaagatgaaggctgcagcaggt
gggaatgactcgggacagtttcaatatcgagacagagccaaggagagacgtgacaagtac
gggattccccctcccccagaaccccgacacaagagaccagatcttcctgtaccgtatgag
cagcctaccaagtctggtatcggaggagacaacataggcaataagctactacagaagatg
ggctggaaggctggcaaagggctgggcaagtctggacagggcatcgtcaaccccatcgag
gctgagaggagagcccaggcggctggactaggtatgagaggagctaactatggcacgacc
gccggcgacgattacagagagtccgtcaagaaaaccatgtttgccagatatcatgaaatg
gactcctga
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