Magallana gigas (Pacific oyster): 105332121
Help
Entry
105332121 CDS
T03920
Name
(RefSeq) DDB1- and CUL4-associated factor 4
KO
K11799
DDB1- and CUL4-associated factor 4
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
crg04121
]
105332121
Ubiquitin system [BR:
crg04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
105332121
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_DCAF4
WD40_CDC20-Fz
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML_2
Beta-prop_EIPR1
WDR55
WD40_Prp19
Beta-prop_VPS8
DUF7307
Motif
Other DBs
NCBI-GeneID:
105332121
NCBI-ProteinID:
XP_034324236
LinkDB
All DBs
Position
6:16849585..16853871
Genome browser
AA seq
507 aa
AA seq
DB search
MKVKVEQHVLNFELPIGMKPRHSLPGWNKTGGRGQDAREQNPTHSRRGKRRWRKKRDFRP
SSGESSGSGEHLAEGTSSSSTRTDHEIPGFYYDPEKKRYFKIQPNQFSSLGHTITKQNIE
KKALETERIRNLTKQTDKVHSHHFLELMSKQEMGSVTRLQFQRYFIHKRISCIENHPSQT
LSASSIHGTLEHPKVIGLNSSHDKLISMWSLSSSLAKCINMVDIDVSNTGDIVIDFDKPS
LNLCNSASSMYWTERKKSLPLHLLYTTGPYFGNESCTAHICQVSNEGLCGTTNSYSIGQQ
YVWCCALDPDYRKFSIGCEKGALLIEVETRRLWEISTHRGDVSSIVFSHKIPSTLYCGNT
KGSIFTHDTRSHTNQTLSQPKMTGIVTSLQLTWDDIHLLASDALGKAFLWDLRMKRVLVE
YTGMKNKGTRIPVYMDDAEKLVYGCDLEGYTRFWCKNSGKLLRTIPSPVQCSSTSVPVVL
YSETWGNRTGNSALLLGAGNKLYVYKV
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtgaaagtagaacaacatgttttaaacttcgaattgccaattggtatgaaacca
cgacactctctacctgggtggaataaaactggaggcaggggtcaagatgcaagggagcaa
aatccaacccacagtcgcagaggaaagagacgatggcggaaaaaacgagatttcagacca
tcttctggagaatcatcgggtagtggcgaacatctggcagagggaacctctagctccagt
acaagaacagaccatgaaataccagggttctattatgacccagagaagaaaagatatttc
aaaatccagcccaatcaattctctagcttgggacatacaataacaaaacaaaacatagaa
aagaaggcactggaaacagaaagaattaggaatctcacaaaacaaacagataaagtgcac
tcgcaccatttcctggaactgatgagcaagcaggagatgggaagtgtaacaaggcttcag
tttcaaagatatttcatccataagagaatatcatgcattgaaaatcatcctagtcagact
ttaagtgcttcatcgattcatgggactctggagcatccaaaagtgataggacttaactct
agccatgataaactcatatcaatgtggagtctttctagtagtttggccaaatgtattaat
atggttgacattgacgtgagtaatactggagatatagtgatagattttgacaaacccagt
ctcaatttgtgcaatagtgcttcaagcatgtattggactgagaggaaaaagtccctgcct
ttacatttactctacacgacagggccgtattttgggaatgaaagctgtacagctcatatt
tgtcaggtttcaaatgaaggtttgtgtgggacaacaaattcgtacagcatcggccagcag
tatgtgtggtgttgtgccctggatccagactataggaagttcagtattggttgtgaaaaa
ggtgctcttcttatagaggtggaaacaagacgactttgggagatctcgactcacagaggt
gacgtctccagtatagtcttcagtcataagatcccaagcaccctctactgtgggaacaca
aagggatctatttttacccatgacactcgcagtcatactaatcagacgctgagccagccg
aaaatgacaggaatcgtaacaagtttgcagttaacatgggatgacatccatcttctagcc
agtgatgctcttggaaaagcctttttatgggacctgagaatgaagagagttctagttgag
tacacaggaatgaagaataagggaacaagaatcccagtttacatggatgatgcagagaaa
ctagtgtatggatgtgatttagaaggatacaccagattttggtgtaaaaattccgggaaa
ctcctaaggaccattccctccccggtgcagtgttcatcaacgagtgtaccagttgtgttg
tattctgagacctggggcaacagaacaggaaactcagccctgctgttaggggctggaaat
aaactatatgtttataaagtttaa
DBGET
integrated database retrieval system
