Magallana gigas (Pacific oyster): 105332131
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Entry
105332131 CDS
T03920
Name
(RefSeq) RNA polymerase II-associated factor 1 homolog
KO
K15174
RNA polymerase II-associated factor 1
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
crg03021
]
105332131
Transcription machinery [BR:
crg03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
105332131
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Paf1
PKD_3
Motif
Other DBs
NCBI-GeneID:
105332131
NCBI-ProteinID:
XP_034324244
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All DBs
Position
6:16746718..16754203
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AA seq
479 aa
AA seq
DB search
MPPTVQSGPRDDRDRKRPGERRSELVCRVKYNNTLPDIPFDPKFITYPFETNRFVEYKPT
SLERSYKYDLLTEHDLGVTIDLINPDTYRIEPGAYLDPEDERLLEEDLNTPTDSKRSRQH
NTTVSWLRKTEYISTEYNRFTQKSDNSERKVGFKIKQIMKDEDIYKDRASQIQAIDKTFE
QAKEKITKHYSKPGVTPVEVLPVFPDFDLWKHPFAQVIFDSDPAPKGRPQPAQMEEMSQA
MIRGAVDENNEQFVAYFLPTEETLTKRKRDSEEGVDYNAEDEYDYTLAREYNWNVKNKLS
RGYEETYFFVFREDGMFYNELETRVRLSKRRKTGGAQMAKSRLIVKHREVNEREVAAQNA
RLMMLEPQQEEEEEEEAQEEQLAGSDEEFRSGSEAGSVKSAGSRHSRSRSRSGSRSPSRS
RSRSRSRSSSRSSRSRSRSASGSRSPSPARSESEHGSDSDRGKKDEEEIFGSASSSDED
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgccaccaacagtacagtcaggtccacgagatgatagagaccgaaaaagaccaggagaa
agaagatctgagttagtgtgcagagtgaaatacaacaacactttaccagatatacctttt
gaccccaaattcatcacttacccttttgaaacaaacagatttgtagagtataaacccaca
tcattagagcggagctataaatatgaccttctaacagaacatgatcttggtgtgacaatt
gacctcataaatccagatacataccggatagagccaggagcatacctagatccagaagat
gaaagactattggaagaagacctcaatacacccacagattcgaaaagatctagacagcac
aatactactgtatcatggttgcggaaaacagaatacatttctacagagtacaacagattc
acacagaaatcagataactctgagagaaaagttggatttaagataaaacagatcatgaaa
gatgaagacatatacaaagacagagcgagccagatacaggccatagataagacatttgaa
caagccaaggaaaagatcaccaaacattacagtaagcctggtgtgacacctgttgaagta
ctgccagtgtttccagactttgatctatggaaacatccatttgcccaagtcatttttgac
tctgaccctgctcccaagggtcggccccagccggctcagatggaagagatgtctcaggcc
atgatcagaggtgctgttgatgaaaacaatgagcagtttgttgcatacttcctgccaacc
gaggaaacgctaacaaagagaaagcgagattcggaggagggggtggattataatgctgag
gatgagtatgattacacactagccagagaatacaactggaatgtcaagaacaaactctcc
agaggttacgaggagacatatttctttgtgttcagagaggacggaatgttttacaacgag
ctggaaaccagggtgagattgagcaagaggagaaagacaggaggagcacagatggccaaa
tctcgacttatcgtcaaacaccgagaagtgaacgagagagaggtagcagcacagaatgcc
cgattgatgatgttggagccccaacaagaggaggaggaagaagaagaagcacaagaggag
cagctggctggatcagatgaagaattccgcagtggtagtgaagcaggaagtgtcaaatcg
gctggaagtcgtcacagccggtcaaggtcacgtagcggtagtcgcagtccatcgcgcagt
agaagcaggagtcgcagcagaagcagcagtcgatcatctcgtagtcgcagcagaagtgcc
agtggaagccggagtccttcaccagcaagaagtgagagcgaacacggcagtgacagtgac
cgagggaagaaggacgaggaggagatcttcgggtcggccagcagctctgatgaagattga
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