Magallana gigas (Pacific oyster): 105332194
Help
Entry
105332194 CDS
T03920
Name
(RefSeq) eukaryotic translation initiation factor 3 subunit B
KO
K03253
translation initiation factor 3 subunit B
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crg03019
]
105332194
03012 Translation factors [BR:
crg03012
]
105332194
Messenger RNA biogenesis [BR:
crg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
105332194
Translation factors [BR:
crg03012
]
Eukaryotic type
Initiation factors
eIF-3
105332194
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eIF2A
WD40_WDHD1_1st
Beta-prop_WDR19_1st
RRM_1
WD40_Prp19
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
RRM_Nup35
Syntaxin
Motif
Other DBs
NCBI-GeneID:
105332194
NCBI-ProteinID:
XP_011432969
UniProt:
K1R9T2
LinkDB
All DBs
Position
7:complement(17191051..17196861)
Genome browser
AA seq
701 aa
AA seq
DB search
MAADRGSDSESRRHRKSESQSQGSVNGDEIEEPDFSDPEGYVDDISEEELLGDLLRSKPK
ESDGIDNIVVVDNVPQVGPDRQEKLKNVIRKIFEKFGKINREFFPVTNEKTKGYVFIEYT
SPLHASEAVKMANGYKLDKQHTLQVNIFSDFDKYEKIPEEWEPPKPKPYHDVGNLRYFLQ
EPDCYDQFSVIYDGGDRTAIFKNTAREPVLIEERARWTETYIRWSPQGTYLATFHAKGIA
LWGGEKFEQIMRFSHPGVQLIDFSPCERYMVTFSPILSTQEDQQQIIIWDIRTGMKKRGF
HCETQSTWPILKWSNDGSYFGRITPDTLSVYETPSMGLLEKKSLKITGLRDFSWSPSDNI
IAYWVPEQQNVPARVTLIQMPSRQELCIKNLFNVADCKMHWQKNGDYLCVKVDRYSKAKK
IDEKDQFKYSGLYYNFELFRIREKQIPVDKVEVKENVIAFAWEPVGSRFAFIHGESPRIS
VSFYQIRPGKVETIKTLERKQANHLFWSPAGQFIVLAGLRNMNGVLEFVDASDVTVMAQT
EHFMATDVEWDSTGRYVVSAVSWWGHKVDNGYWIWSFQGRLLQKIQLERFCQLLWRPRPP
SLLSLEQMRAIKKNMKKYTEQFEVMDRLRQSNVSTEILEKRSEMMNEYKSFRERATEEWE
SMKYRRLELRDGVDTDTLEYEENDEEIVEFLLKVEEVVVEE
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgacaggggctccgatagcgagtcaagaagacatagaaagtctgaatcgcag
tcacaagggagtgtaaatggtgacgaaatagaggaaccagatttcagcgatccagagggt
tacgtcgatgacatttctgaagaagaattgctaggagatttactgaggagcaaacctaaa
gaatcggatggcattgataacattgtcgtggtagataatgttccccaagtaggacctgac
agacaggaaaaactaaaaaatgtcatcagaaaaatcttcgagaagtttggcaaaatcaac
agggaattttttccagttactaatgaaaagacaaaagggtacgttttcattgaatacacc
tcacctctccatgccagtgaggctgtcaagatggcgaatggatacaagcttgacaagcag
catacccttcaagtgaacattttttctgactttgacaagtatgagaaaatcccagaggag
tgggaaccacctaaacccaaaccttaccatgatgtcggaaacctgcgctacttcttgcaa
gaaccagactgttatgatcagttcagtgtcatatatgatggaggagacagaacagctata
ttcaagaacactgccagggaacctgtgcttattgaagaaagagcaaggtggactgagacg
tacattcgctggtcaccccagggaacctacctagcaaccttccatgctaagggcatagct
ctgtggggaggggaaaagtttgaacagatcatgaggttcagccaccccggggttcagctg
atcgacttctctccctgtgagcgatacatggtgacgttcagccccatcctttccacccag
gaagaccagcagcagatcattatctgggacatcaggactggcatgaagaagcgaggcttc
cactgcgagacacaatccacctggcccatactcaagtggagcaatgatggaagctacttt
gggaggattaccccagatactctcagtgtttatgaaacaccatcaatggggttgcttgag
aagaaaagtttgaaaattactggactgagggacttttcctggtctccctctgacaacatc
atagcctactgggtgcctgaacagcagaacgtaccagctagagtcactctcatccagatg
cctagtcgccaggaactgtgtatcaaaaatctcttcaatgtcgctgactgcaagatgcac
tggcaaaagaatggggactacttgtgtgtcaaagtcgatcgctactccaaggccaagaag
attgatgagaaagaccagtttaagtacagtggtctttattacaatttcgagctgtttaga
attcgagaaaagcagattccagtggataaggtagaagtcaaagaaaatgtgattgcattt
gcctgggagcctgttggcagtcgatttgcatttatacatggagaatcccccaggatttca
gtttcattttaccagatcagaccagggaaagtggaaactatcaaaactctggaaagaaaa
caagcaaaccacctgttctggagtcccgctggacagtttattgttctagcaggattacgc
aacatgaatggagtgctggagtttgtggatgcctctgacgtaactgtgatggctcagact
gagcacttcatggctacagacgttgagtgggactccacaggcagatacgtggtgtccgcg
gtcagctggtggggacacaaggttgacaatggctactggatctggtctttccaagggcgt
ctgctgcagaaaattcaactggagcgattctgtcagttgttatggcgaccacgccctccc
tccttattgtctctagaacagatgcgcgccattaagaagaacatgaagaaatacaccgag
cagttcgaggtcatggacagacttagacaatccaatgtttctactgaaattcttgagaag
agaagtgaaatgatgaatgagtacaagagcttcagagaacgagccactgaagagtgggag
agtatgaaatacaggagattagaactcagagacggggtggatacggacacgttggagtac
gaggagaacgacgaggagattgtagagtttttgcttaaagtcgaagaagtcgtggtggaa
gagtaa
DBGET
integrated database retrieval system
