Magallana gigas (Pacific oyster): 105332376
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Entry
105332376 CDS
T03920
Name
(RefSeq) WD repeat-containing protein 47 isoform X3
KO
K24746
WD repeat-containing protein 47
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
crg04990
]
105332376
Domain-containing proteins not elsewhere classified [BR:
crg04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
105332376
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_WDR19_1st
NBCH_WD40
Beta-prop_EML
Beta-prop_HPS5
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
TPR1-like_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
Beta-prop_SCAP
WD40_RFWD3
Ge1_WD40
Motif
Other DBs
NCBI-GeneID:
105332376
NCBI-ProteinID:
XP_011433251
LinkDB
All DBs
Position
2:57849309..57858521
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AA seq
1082 aa
AA seq
DB search
MPAPSIIVDETDVVRLVSEFLHNRDLNISMLSVERETGIINGEFSDDMLFLRQLILDGQW
DDVIDFIQPLSSVETFNYTKFQYIIMKHKYLELLCIKSEPSVMQNYDFTVEEVVKCLNSL
ESLCVSKEDYNNLCLLLTIPKISDHPEYQNWNPSNARVKCFRDVTPLVEKYLTPMDQSKK
NAKTAEDDRLLQLVLKGILYESCVEYCQQRATSSEACDEMTFPALLTNSGFSDADLSLIS
WLQHIPNETFSCPFEQKSLKFDIRQLVKPTLEASWSEQILVTPIKPKLFPHSAVPNMRPR
SADVMTRSLNPQFDGLSRGLWQGGRKNMSASVSGSSTLSQSMSVVSGIGLNNALKDPMQM
SMDKLFSEGEMVNTQSSTVLEENSPRQKVEEGKPQTNKNLNLNDETKPTPPVATIAPQDK
LQNKNNPKPTVDEEMSKSSTELLKEFQRQKQVCREQIEIYEQQREKMLKELMTIESKTSM
IDNREGPATQEQTESIFPQNPGSHSNQTNNVSHINQTNKLNSKPVQKHSNSPTNVNTVNS
QTVPTPIPDVNPVCNRQTSPVTHPVTHIYQVDSLANTPTCEFVVGGHELGSDRSILTPVN
VEETSKVNPPPSPNTLPRESAPAIDSSRQPEPTGRSTTHSTKSVKAKATPNTQGSQGKPA
TSRKTNTTASAGREKCADSKPTKTTGSKSLGRGTATRPTTLTPGGLGRAKRAPVPSKVDN
KPAVVGGVGTKPIGPVISQSPKKTPRPVSQIDLEDQKMSRPKFVPICRLEDPQAIRTVAF
HPSGTMFAVGSNSKTLRVCAFPDVSNLSETHETFETQTMYTKHKHHKGSIYCVAWSPMGD
LLATGSNDKTIKMFQYNMDMNAQGPEMELSFHDGTVRDMVFMQDTINRSSLLISGGAGDC
KIYVTDCETGMPVRAMAGHSGHVYALHSWGGCMFVSGSADKTARFWDLRASTAITVVPSS
TGSAFASVCVDPSGRLLASGHEDGSVMLYDIRGSRGIQSFRPHSGECRTVRFSMNAFYLL
TGSYDKKIIMTDMHGDLLRPLPSVVVAEHEDKVIQCRWHPSQLAFISSSADRHVTCWGLP
VV
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctccaagtattattgtggacgagaccgatgtggtcagactggtatcagaattt
ttgcacaacagagatctgaatatttctatgctttcggtagaaagagaaacgggtatcatc
aatggcgaattttctgatgacatgttatttcttagacagctgattttagacggtcaatgg
gatgatgttatcgattttatccaacctctgagttccgttgagactttcaactacacaaaa
tttcagtacatcattatgaaacacaaatatcttgagcttttatgcatcaagtcagaacca
agtgtaatgcagaattatgatttcaccgtagaagaggtagttaaatgtctgaacagttta
gaaagcttatgtgtttctaaagaagattacaataacttgtgcttgcttttaacaattccc
aaaatttctgatcatccggaataccagaattggaatccaagtaatgccagagtgaagtgt
ttccgagatgtaaccccccttgtggagaagtatcttacacccatggatcaatccaaaaag
aatgcaaaaacagctgaggatgacagacttcttcagctagtgctgaagggcattctttat
gaatcttgtgttgagtattgccagcagagagcaaccagctctgaggcatgtgatgaaatg
acatttcctgctctcctcacaaattctggatttagtgatgctgatcttagtttaatttcc
tggttgcaacacataccaaacgaaacattctcttgcccctttgagcagaaatcattgaaa
tttgacataagacagttagtaaaaccaactttagaagcatcatggtcagagcaaattcta
gtgacccctatcaaacccaagctgtttcctcattcagctgttcccaacatgagaccaagg
tctgcagatgtcatgacaagatctttaaacccacagtttgatggcttgagtcgagggctc
tggcaggggggaaggaagaacatgtctgcctcggtcagtggaagcagcacactgtcacag
tccatgtctgttgtgtctggcattggtctgaataatgctttaaaagaccccatgcagatg
tcgatggataaactgttttcagaaggagagatggtgaacactcaaagttcgacagtattg
gaggaaaattctccaagacagaaagttgaagaaggaaagcctcagacaaataaaaaccta
aacctgaatgatgagacaaagccaactccacctgttgcaactatagccccacaagacaag
ttacagaacaaaaataatcccaagccaactgttgatgaagaaatgagcaagtcatccaca
gaactgttaaaggaatttcagcggcagaaacaggtgtgtagagaacagatagagatatat
gagcaacagcgagagaagatgctgaaggagctgatgacgattgaaagcaagaccagcatg
attgacaacagagagggaccggccacacaggagcagacagagtccattttcccacaaaat
ccaggctcgcattcaaatcaaactaacaatgtttcacacataaaccagacaaacaagctc
aatagtaaacctgttcaaaaacattcaaacagtcccacaaatgtcaacacagtaaattct
cagactgtcccaacacccatccctgatgttaaccctgtctgtaacagacaaaccagccct
gtgacacaccctgtaacccacatctaccaagtagacagtctggccaatacccccacctgt
gagtttgtggttgggggtcacgagctagggtcagacaggagcattctgaccccggtcaat
gttgaggaaaccagcaaagtaaaccctccaccaagccctaacacattacccagagaatca
gcacctgccatagactcatcaagacagccagagcctacaggccgttctaccacccactcc
actaaatctgtcaaagctaaagccacacccaatacccaaggcagtcagggtaagcctgct
accagcagaaaaacaaacacaactgcatctgcaggtagagaaaaatgtgcagactcaaaa
cctacaaagacaacaggttcaaaatccttgggccgtgggactgccacaaggcccacaact
ctgacccctggaggtctgggtagagccaagagggcgccagtgcccagtaaagtagacaat
aagcccgctgttgttgggggagtcggaaccaaaccaattggaccagtaatatctcagagc
cccaaaaagacgcccagacccgtcagccagattgatcttgaggaccagaagatgtcccgc
cctaagtttgtcccgatctgtcgtctggaggacccccaggctatccggacggttgccttc
catccctccggaaccatgttcgctgtcggatccaactccaagaccctgcgggtctgtgcc
ttcccagatgtttccaatctcagtgagactcacgagacatttgagacacagaccatgtac
acaaagcacaagcatcacaagggctcaatctactgtgtggcctggagccccatgggggat
ctactggccaccggctccaacgacaagaccatcaagatgttccagtacaacatggacatg
aacgcacaagggcctgaaatggagttatcctttcatgacggtacagtacgagacatggtc
tttatgcaggacacaataaatcggtcgtctctgttgatcagtggaggggcaggggattgt
aagatctacgtcacagactgtgagaccggcatgcctgtacgagcaatggccggacactcg
ggtcatgtgtatgcccttcattcctggggtggctgtatgtttgtcagtggatcagcagac
aagacggccaggttctgggacctccgagcttccaccgcaatcactgttgttcctagctcc
actgggagtgcttttgcctcagtatgtgtggacccctcggggcgcctcctggcctcaggc
catgaagatggcagcgtgatgctgtatgacatcagagggtcgagagggatccagagcttc
cgaccccactctggggagtgtcgcacagtccgattctcaatgaacgctttctatctgctg
actggctcatatgacaagaagatcattatgactgacatgcacggtgaccttcttcgaccc
ctacccagtgtggtggtggcagaacatgaagacaaggtcattcaatgtcgatggcaccca
agtcagctggcctttatcagctccagcgctgaccgacatgtaacctgctggggacttcct
gttgtctga
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