Magallana gigas (Pacific oyster): 105332654
Help
Entry
105332654 CDS
T03920
Name
(RefSeq) LOW QUALITY PROTEIN: zinc finger protein 1-like
KO
K23560
zinc finger homeobox protein 2
Organism
crg
Crassostrea gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
crg03000
]
105332654
Transcription factors [BR:
crg03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
105332654
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
Homeodomain
zf-C2H2_jaz
zf-C2H2_6
zf-met
PyrI_C
Homeobox_KN
Zn-ribbon_8
zf-C2HC_2
Motif
Other DBs
NCBI-GeneID:
105332654
NCBI-ProteinID:
XP_034338899
LinkDB
All DBs
Position
LG1:29142130..29150980
Genome browser
AA seq
760 aa
AA seq
DB search
MPIPEQPVRYQCPKCEAIFMQKSFLDKHLPTHCPTSQSCKVCNKTFANVYRLQRHMISHD
ESTDLRKFKCPECGKAFKFKHHLKEHIRIHSGEKPFECPNCHKRFSHSGSYSSHMTSKKC
WVAGPKAHTTERVNHMEPTVTYSKPLISKGAFTPPVHMLTSMAQGPFPRVPYLHFDPKGS
MPFFTPPPAFVPYSYSMIRHSSPMNPLISLQGKTDCIPSHHSISPSHGSTAQISPDVNSN
TQLFSMHKPSVKDSPVIKREPESKEEPSSTDSASAPKERTFKDSKPGDDTEKKTTSDAED
VKPDIKMEEQEKEKIPCHFCSEVFNSAVDQHQHERYLCKANKELLNRSSLSDSSRNSPCS
SISDASHRGTPNGSYSAPDTDHEDDSESKKFRMRTHISEEQLAVLKSHYKENPRPRKFEL
IRIGKEIGKEKRVVQVWFQNMRARDRRQGKHVPYVPSMARFKHSDNSSWKEHSPSHSSYI
PVVPEHNQSTWEENGCSIHQQARGTAFGSYSSSIPLKSSSLNMSGKLDNGTEGSKKEGRL
QSSAIYKYLQQEGMLPRHFFGNYLPHPPTSVFQPFLQATHDGASTDRAMADATLNLATLA
EVSLSQRAAMMENSLKSKRLRKKSWRQMEAEEVQMDLDDSLLDDDNPLKKKRRSWKGHKI
DAEEGMYACDQCAKVFSKQSSLARHKYEHSGARPFTCEICGKAFKHKHHLTEHRRLHSGE
KPFECKKCGKRFSHSGSYSQHMNHRYKYCKPLREDGFSSS
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgcccatcccagagcagccagtcagataccagtgtcccaagtgtgaggccatcttcatg
cagaagtccttcctagacaagcacctacctacccactgtcccacctcccagtcctgtaag
gtctgcaacaagacgttcgccaatgtgtaccgcctgcagagacacatgatcagtcatgac
gagagcacagacctacgcaagttcaagtgtcccgagtgtggcaaggcatttaagttcaag
caccacctgaaggaacatatccggatacacagcggagagaaaccttttgagtgtccaaac
tgccacaagcgattcagccactccggatcctacagcagtcacatgacctccaagaagtgc
tgggtggcaggaccaaaggcccacaccactgagcgagtcaaccacatggagccaacagtc
acctattccaagcctctcatttccaagggagccttcactcctcctgtccacatgttgact
tccatggctcaaggaccattcccaagagttccatatctgcatttcgatccgaaaggaagc
atgccattctttactccacctccagcctttgtaccatactcatattccatgattcgtcac
agctcaccaatgaatccactcatctctcttcaagggaagacagactgtattccttctcat
cacagcattagcccatcccatggaagtactgctcagatatctccagacgtcaattccaac
actcagcttttttccatgcacaagccctcagtcaaggacagtcctgtaatcaagagagag
cctgaatccaaagaagagccatcttcaactgattctgcatcagcaccaaaggagagaact
ttcaaggatagcaagccaggggatgacacagagaagaagaccacatcagatgcagaggat
gtcaaacctgatataaagatggaggagcaggaaaaggagaagatcccttgtcacttctgc
agcgaggtcttcaacagtgcagtggatcagcatcagcatgagcgatacctgtgcaaggcc
aacaaggaacttctaaatagatcttcattaagtgacagttccagaaactctccatgcagt
tccatctcagatgccagtcatcgtgggaccccaaatggcagctatagtgccccagacaca
gaccatgaagatgacagtgagtccaagaagttcagaatgcgcacacacatcagtgaagag
cagttggcagtgctgaaatcccactacaaggaaaatccaaggccaaggaagtttgagctg
atccgcattgggaaggaaatcgggaaagagaaaagggttgtacaggtgtggttccagaac
atgagagccagagacagacgtcaagggaagcatgtgccatacgtcccctccatggccagg
tttaagcatagtgacaacagttcatggaaggagcattcacccagtcactccagctacatc
cccgttgtacccgaacacaaccagagcacatgggaagaaaatggatgttccatccaccag
caagccagaggaacagcctttggatcttattcctcaagtattcctctcaagtcctcatct
ctgaacatgagtgggaagctggacaacggtacagaaggatccaagaaagaaggtcgactt
cagagttcagccatctacaagtacctacagcaagagggaatgcttccaagacattttttt
gggaactacttgcctcatccaccgacatcagtgttccagccatttctgcaagctacacat
gatggagcaagtaccgacagggccatggccgacgccaccttgaacctagccaccctcgcc
gaggtcagcctgtcccagagagcagccatgatggagaactccctcaagtccaagcgcctg
aggaagaaaagctggcggcagatggaagcagaagaggtacaaatggacctggatgactcg
ttgcttgatgatgacaaccctctgaagaagaagcgaaggagctggaagggacacaagatt
gatgcagaggagggaatgtatgcatgtgaccagtgtgctaaagtcttctcaaagcagagc
tccctggccagacacaaatacgaacactctggtgctcgcccctttacatgtgagatctgt
ggaaaggccttcaaacacaagcatcacctgacggagcaccggcgactacactccggggag
aagccgttcgagtgcaagaaatgtggcaagcgcttcagtcactcagggtcgtacagtcag
cacatgaaccaccgctacaagtactgtaaaccgctccgagaggacggcttcagctcctcc
taa
DBGET
integrated database retrieval system
