Crassostrea gigas (Pacific oyster): 105332786
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Entry
105332786 CDS
T03920
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
crg
Crassostrea gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
crg04121
]
105332786
Enzymes [BR:
crg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105332786
Ubiquitin system [BR:
crg04121
]
Ubiquitin ligases (E3)
U-box type E3
105332786
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DWNN
zf-CCHC_2
zf-C3HC4_2
zf-C3HC4_3
zf-C3HC4_4
zf-C3HC4
U-box
zf-CCHC
zf-RING_5
zf-CCHC_3
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
105332786
NCBI-ProteinID:
XP_034314367
LinkDB
All DBs
Position
LG10:complement(30446580..30463208)
Genome browser
AA seq
1519 aa
AA seq
DB search
MACIHFKFKNSLDYDSITFDGLHIALRDLKRMIMNRKKLRDTDDDLQIINAITKKAYTNE
DEMIPKNSSVIVARIPVTNAAPRNGPKTLNHPNAYKEDPKPVRKPMEVPVTKPQDPLETG
NLIDSNASEEDKIKAMMRQSTMDFDPSNYINNKKAPIGTPSPTYICKKCGKSGHFIQNCP
VEPGEAFDKEKIAKRPTGIPHSFLTKVNDPNAKGALLIGPGQYGVPTIDMNAYQTKKKER
PPFLPEEKLPEPKKEEIPAELLCPLCRDLLSDAVLIPCCGTSFCDDCIRNELLDSEDHEC
PQCHETDKSPDSLIANKSLRSAVFNYRNETGYTKITKAMLKSQQEKVAVERAARKSEVKE
KRTAPAISRPYEKPASAQAIPTYGMKAGQHYKVGGFQGGRSPGSPANASPKISDSQNGSD
PSAGTKPSLLVSTTPGPVPGGLSPPTPCKDEANLLTPASSAQVSVQSTSTSVQPSLSASV
TSVIPQRAPVIPASFPTAPIQTVGVPYRPPLPPMVNPSIPPPGFVAPPPTGPFVAGPRFP
PAPAVIPPFQAVPPPSMPLSKEEFYRRQKKMQELEKKKKADPLDVFARELMDYKKKPKSA
SRSRSRSRSRTPRRSITPRRSRTRSKSRSITPRKRSRSLTPRKRSRSLTPRKRSYTPRSR
TRSRSRSPKRSRSPYGKPPYRSRSRTRSRTPPRYRSRSRSFSPRYRSRSPRPRSYSRSPV
RYRGRSPPPRWRSRSRSPGRYDRWSPPPYGRRRSRSPPPPLYRGRSRSPPPYDYFRPEWD
APPPMYGDYRGPPARPGGRGPIPPHYQYPQDQFNRFDPHAYDEFYHEYYARYGMPPPPPP
ANQMYDAPSFPPRRSRSPRDRRPFKERPLPRPKTEDSKTNRPDKKSVDKKPEKKLSKSSS
KREEEKAGKKKKSEKPSNKEKDEESKVEEKKENVVEKKEEVKDSQSKKKKKGSSKTSKKE
PVESDVKEEKSKDEEDKKPVKSDEEKDGKEDIKEKDAQEKVEKKEIKDVENLGVKKEKLE
DVKESKEEKVRSKKKSSAKKDSGEKLESLKSPKQEIKSPKEETSKEGERKAKRKHKKMVK
EAATKEKKLVEDDEAEESPAKRQKTEPVTDSGDQIMLSPPILSKWEKEDYHDDISPRRSR
KASPDSRPSKSKQDRRMLPRSVIEKAEKALALKQPQPISVASSIKPSSSLANRLEKSPPP
KLRSPDGKPRRVYVEKESNKKVEEDSRKVLSRDRSMQITVSGDVKSKTKSKDSKKEVKDL
RESLLEKRRASTRSSSTEEFEQNKGKGFSHDDRLSVNYAREKDWDYIDDDKNTDGWLSNK
VKGSSKSMKARKDITEERRSASKEKLVEKRRKSREDKESPRRSRKDENGEDKISKKNSRS
QEKKDDKKRKEDHVSKRDSAEKVTEKKEHKEKDDAEKSGGTKQQIRVDRKESLFDESAFV
PDYNETMGSESEEDVPKQELKRQYSTAESEKVESESEEESSGEEREKKHKKKKSKHKKNK
KKHKKHKKKHKKQDGDESS
NT seq
4560 nt
NT seq
+upstream
nt +downstream
nt
atggcctgtatccacttcaagttcaagaacagcctggactatgattccatcacgtttgat
ggtctgcatattgccctgcgagatctgaagaggatgataatgaacagaaagaagctcagg
gacactgatgacgatctacagataatcaacgccatcacaaaaaaagcatacacaaatgaa
gatgaaatgattccaaaaaattcttcagtcattgttgcaaggatacctgtcactaatgct
gctccacggaatggaccaaaaacactcaaccatcccaatgcctacaaagaagaccctaaa
ccagtcaggaagcccatggaagttcctgtgactaagccccaagatcctttagagactggt
aaccttatcgattctaatgcgtcagaggaagacaaaatcaaagccatgatgaggcaatca
accatggactttgatccttcgaactatatcaataacaagaaagctcccattggaactccc
tcacctacctacatttgtaagaagtgtggtaaatctggccacttcatccagaactgtcca
gtggaaccaggggaggcctttgacaaggagaagatcgccaagagacccacaggaatcccc
cattcctttctgacgaaggttaatgaccctaatgccaaaggtgcattgttgataggcccc
gggcagtatggagtacccaccattgacatgaatgcctaccagacgaagaagaaggagcga
ccacctttcctaccggaggagaagctgcccgaaccgaagaaggaggaaatccctgcggaa
ctcctctgtcctttgtgtagggatctgctctcagatgctgtcttgatcccatgctgtgga
actagtttttgtgatgattgcatcagaaatgaattgttggactcggaggatcatgaatgc
ccccaatgtcatgagactgacaaatcacctgacagtctgattgccaataaatctctccgg
tcagccgtctttaactatcgtaacgagactggctacacaaagatcaccaaggcaatgcta
aagtcacaacaagagaaggtggcagtagaaagggccgcaaggaaatcagaagttaaagaa
aaacgcacagcacctgcaatctcccgaccttatgagaaacctgcttctgcacaagctatt
ccaacatatgggatgaaggcgggacaacattacaaagtgggaggatttcaagggggtcga
tctccaggctcaccagccaacgcctcgcccaagattagcgactcacagaatggttcggat
ccatcagctgggaccaagccctccctgttagtgtcaaccaccccaggcccagtccctggg
ggtctcagtcctcccactccctgcaaggatgaagcaaatcttttgaccccagcatcatct
gcccaagtttcggttcaatcaacttcaacgtctgttcagccttctctgtcagcttctgtg
acttctgtgataccccaaagggctccagtgatcccagccagctttccgacagcccccatc
cagactgttggtgttccataccgacctccattgccgccaatggtaaacccatccattcca
ccccctgggtttgtggctccccctccaacaggaccattcgtggcaggacccagattcccc
ccagcaccagcagtgatccccccattccaggctgtcccccctccctctatgcctttgagt
aaggaggaattttaccgacgacagaagaaaatgcaggaacttgagaaaaagaaaaaggca
gaccccctggatgtgtttgccagagaacttatggattacaagaaaaaaccgaagtctgca
tcaagatccagatccagatctcgttcaagaacacctagacgttctattactccccgcagg
tccagaacaaggtcaaagtcaagaagtataacgcctaggaaacgatctcgtagtttgact
cccaggaaacgatctcgaagtttgaccccgaggaaaaggtcctacacacctagatcaagg
acaagatctcgctctaggtcacccaagcgatcgaggtctccatatgggaaacctccatat
cgatccaggtcacgtacaaggtcaaggaccccacctagatataggtcaaggtctaggtct
ttctcaccaagatatcgctccaggtcaccaagacccaggtcctactccagaagtcctgta
agatacaggggtaggtccccgcccccacgatggagatctcgttcacgcagtccaggacgt
tacgataggtggtcacctccaccctatgggcgccgcaggtctaggtcaccacctccgcca
ctttacaggggtagatcaaggtcacctcccccatatgattacttcagaccagagtgggat
gccccaccccccatgtatggtgattacagaggaccacctgccagaccagggggaagagga
cccatacctccccactatcagtatccacaagatcaatttaacaggtttgatccacatgct
tatgacgaattttaccatgagtattatgccagatatggcatgccaccccctcctccacct
gcaaatcaaatgtatgatgccccttcatttccccctcgaagatctcgatctccaagagac
agacggcccttcaaagaaagacctcttcctcgccccaaaactgaagacagcaagacaaac
agaccagacaagaaatctgttgacaaaaagccagagaagaaattgagtaaatcaagtagc
aaaagagaagaggaaaaggcaggcaagaaaaagaagagtgagaaaccttcaaataaggaa
aaggatgaggagagtaaagtggaagagaaaaaagagaatgtagtggaaaagaaagaggaa
gttaaagacagtcaatctaaaaagaaaaagaaagggtcctccaagaccagcaagaaggag
ccagtagaaagtgatgttaaggaagaaaaatcaaaggatgaagaagataaaaagccagtt
aaatcagatgaagaaaaagatgggaaagaggacataaaggagaaagatgcccaagaaaag
gttgagaagaaagaaataaaagatgtggaaaatctgggtgttaaaaaggagaaactggaa
gatgtgaaagaaagtaaggaagaaaaggtcagatccaaaaagaaaagcagtgctaagaaa
gacagtggtgaaaaattagagtcactcaaatctcctaaacaggagatcaagtccccaaag
gaggaaacttctaaagagggagaaaggaaggctaaacgcaagcataaaaaaatggtgaag
gaagctgcaacaaaagagaagaagctggtggaggatgatgaagcagaagaaagccctgcc
aagcgacagaagacagagccagttactgacagtggggaccagattatgctgtccccaccc
attctttccaagtgggagaaagaggactaccacgatgacatatcccctcgcaggagtcgt
aaagcatccccagacagcaggccatccaagtccaaacaggaccgcagaatgttgccaagg
tcagtcatagaaaaagctgaaaaagccttagcattgaaacagcctcagcccatctctgta
gcttcatcaatcaagccttcctctagcctcgccaatcgacttgagaaatcccctcccccc
aaattaaggtcccctgatgggaaacctcgcagggtgtatgtggaaaaagagtccaacaag
aaagtggaggaagacagtaggaaagtgttgagtcgagatcgatctatgcaaataactgtg
tctggggatgtgaaatcaaagacgaagtctaaagactccaagaaagaagtgaaagatcta
cgggaatctctgttggagaagcggagagcttcaactagaagttcatccacagaagagttt
gaacagaacaaagggaaaggattcagtcatgatgataggttatctgtgaattatgctcgt
gagaaagactgggattacatagatgacgacaaaaatactgacggatggttatctaacaag
gttaaaggctcctcaaagtcgatgaaggctcgtaaagacattactgaagaaaggaggtct
gcttccaaagaaaagttggtggagaaacgcagaaaatctagagaggacaaggaatcaccg
agaagatctaggaaagatgaaaacggggaggacaaaatttcaaagaagaattccagatct
caggagaagaaagacgacaagaagagaaaggaagaccatgtctccaagagagacagtgca
gagaaagtaacagagaagaaagagcataaagagaaagatgatgctgaaaaatcaggagga
acaaagcagcagataagggtggacaggaaggaatccttgtttgatgaatcagctttcgtc
ccggattataacgagaccatgggtagtgaatcagaggaagatgtgccaaaacaggaactg
aaaagacagtactccaccgcagagagtgagaaagtggagagtgaaagcgaggaagagagt
tctggggaggagagggagaagaagcataagaagaagaagagcaagcataaaaagaacaaa
aagaagcataaaaagcataagaaaaagcataaaaagcaagatggggatgaatcttcgtaa
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integrated database retrieval system
