KEGG   Magallana gigas (Pacific oyster): 105333009
Entry
105333009         CDS       T03920                                 
Name
(RefSeq) cyclin-H
  KO
K06634  cyclin H
Organism
crg  Magallana gigas (Pacific oyster)
Pathway
crg03022  Basal transcription factors
crg03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:crg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    105333009
  09124 Replication and repair
   03420 Nucleotide excision repair
    105333009
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:crg03021]
    105333009
   03400 DNA repair and recombination proteins [BR:crg03400]
    105333009
Transcription machinery [BR:crg03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     105333009
DNA repair and recombination proteins [BR:crg03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     105333009
SSDB
Motif
Pfam: Cyclin_C_2 Cyclin_N Cyclin_C TFIIB Spy1 TEDC1 DUF6272
Other DBs
NCBI-GeneID: 105333009
NCBI-ProteinID: XP_065927526
LinkDB
Position
1:complement(70405567..70415950)
AA seq 334 aa
MFASSSQLKHWMFNNEGEIQSLRQEANERYIEEHGTKMSEEQRQAYFLTASEERHLCRHF
EFVLKEFCSRFQPPMPKYVLGTALCYFKRFYINCSAMDYHPKDIMLTCVYLASKVEEFNV
SINQFVGNLKGDREKFANIILTFELLLMDKLNYHLLIHNPYRPMEGLFIDLKTRFRVLEN
PEKLRKGAEEFLEKSLMTDVCMLFAPSQVALTAVLVSAAKEKANLDRYVTETLLKGMSPE
DIKKLQVQIKKLRYMVKSQEQIPREQMAHLQRKLDHCRNQENNPESEVYKRKLQEMLNED
EEIQTKKRKKISEEQKKKDDELLFMPSYVPSSNT
NT seq 1005 nt   +upstreamnt  +downstreamnt
atgtttgcctcaagcagtcagctgaagcactggatgtttaacaatgaaggcgagattcag
tccctgagacaggaggccaacgaacgctacatagaggaacatgggaccaagatgtcggag
gagcagagacaagcctattttctgacagcatcggaggaaagacatctctgccgccatttt
gaatttgtcctcaaggaattctgtagcaggttccagccacctatgcccaaatatgttttg
ggaacagccctgtgttatttcaagcgtttttacataaattgctcagcgatggattaccat
cccaaagacatcatgttgacctgcgtgtacttagccagtaaggtcgaggagttcaacgtg
tcaatcaaccagtttgtggggaacttgaagggggaccgagaaaagttcgccaacattatc
ctgacctttgaactcctgttgatggacaagctcaactatcacctgctgatccacaacccc
tacagacccatggaggggctatttatagatcttaagaccaggttcagagttttggaaaat
cccgagaaactccggaaaggagcggaggaattcctggaaaagtccctgatgactgatgtg
tgcatgctatttgcaccttcacaggtagcattaacagctgtgttggtcagtgctgccaaa
gagaaggctaacctggacaggtatgtaacagaaacactgttaaagggcatgtccccagag
gacatcaagaaactacaggtgcaaatcaaaaagctgagatacatggtaaaatcacaggaa
cagattcccagggagcaaatggctcatctgcagaggaagctggaccactgccggaaccaa
gaaaacaacccagagagtgaagtatataaaagaaaattgcaagaaatgttaaatgaagat
gaagaaattcagacaaagaagaggaaaaaaatcagtgaggagcagaagaagaaggacgat
gagttactgttcatgccatcatacgtaccatcctccaacacgtga

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