Magallana gigas (Pacific oyster): 105333073
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Entry
105333073 CDS
T03920
Name
(RefSeq) prominin-1-A
KO
K06532
prominin 1
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
crg04147
]
105333073
04090 CD molecules [BR:
crg04090
]
105333073
Exosome [BR:
crg04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
105333073
CD molecules [BR:
crg04090
]
Proteins
105333073
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Prominin
Apolipoprotein
SF-assemblin
DUF7605
Motif
Other DBs
NCBI-GeneID:
105333073
NCBI-ProteinID:
XP_011434184
LinkDB
All DBs
Position
8:11573126..11585262
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AA seq
854 aa
AA seq
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MTFLVFQMDIRVIILVLGVSLMVQIDPVGSATITDYFGNKVYDNGTIEWGPVPTGTKYKT
TNTYSDGGLGTLFAFARSFVNTIQPKPFPFSLIKKIMNGEFDIGAQYMELINYAMGFAVC
VVIGLLYVVFMPLCGCCFCCCRCCGNCGGDLKAEYDDNEDCKRMGFAQAVFLLAVLMTAS
AGCIYATNGRFTVALSYADVNIADNLDDVYAYSLNTQSQFRYVAIDMYAIISQAIIRDIS
GIGTVLTTKIFAVLSIDPVINAVLALDTTLNEIDTNLDAVIADKNTLVTAANTLSSSLST
LKSAIDSTKSGCSSDCTPTTVCNSFDTSSMTMNADFSTLPDLTSTQTAIKDVVAKNLTKV
ALEAKAALDNMQTTIDGQTGSIQSSLETTLNTFKATLNTMVDDFLAQINNAFNTRELKNS
MRGFFGSALDYDVYRQYFGYGLMGIFSFIPLLLVGGMLCGCCCKKNVKPTKRGGCESCGG
CLLILAVAIMFLIGALLMLLTTVAFMIGGNFEKICQTFLDMSIFRDFVDDGGVPGFNLGQ
MILNDPAANISLYGTLLGCRMNKAPFELLSLEKIIPIDNYLNYSQYMGDIDTQINSISTA
VDLSSFKVLTPEMNTALNDFKNSGISSIDFAAINTTLGQSTVTIDFNSMISGMESIRDQC
TGTSRNNWIQHITDTKTIRDTTLPAVETAKTNLQTSVGKLEGSVGGVTTKIDDVLATAAT
ADSQIQNNATAVLNDVALTYKNLILGYIDSYFARTRSLISNDLAACLPLWNLYESFTTML
CSYTVDALNGFWFGTGWALILFVPTIITSVKLSKYYRRMKECEGYGSDSEDDDDYSDSDD
DDVFQPRYNQVSPK
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atgacattcctagttttccaaatggatatccgggtcattatccttgtcctaggtgtatca
cttatggtacaaatagaccccgtgggatccgcgaccatcaccgattactttgggaacaag
gtttacgacaatggtacgatagaatggggccctgtgcccactgggaccaagtataagacc
accaatacatacagtgatggagggctggggacgctgttcgccttcgccaggagttttgtc
aacactatccagcccaaacctttcccgtttagtctgataaagaagattatgaatggcgaa
tttgacatcggtgcacaatacatggagctaattaactatgccatggggttcgcggtgtgt
gtggtgataggcctcctctatgtggtgttcatgcctctctgtggttgctgtttctgttgc
tgccgttgctgcggtaactgcggtggcgaccttaaagcggagtatgatgacaacgaggac
tgtaagagaatggggtttgctcaagcggtgtttctgttggctgttctgatgacggcgtcc
gctggctgtatttacgccactaacggccgctttaccgtggcgctgtcttacgccgacgtt
aacattgctgacaacctagacgacgtttatgcttactcgctgaacactcaatcgcaattt
cgttacgttgctatcgacatgtacgctatcatttctcaagcaatcatcagagatatatca
ggcattggaactgttttgacaacaaagattttcgccgtgctaagcattgacccggtgata
aatgctgttttggcacttgatactactttgaacgaaatcgacaccaatttggatgcagtg
atagcagacaagaacactctggttacagcagctaacacgctctccagcagcctgtccacc
ctcaagtcagcaatcgactcgaccaagtcaggatgttcgagtgactgcacccctacaaca
gtctgcaacagttttgatacgtcatcgatgacgatgaacgctgatttttccacgcttcca
gatttgacctctacacagactgcaattaaggatgtcgttgccaaaaaccttactaaagta
gcgctggaggccaaagctgctttggataacatgcagacgacgatagacggccagacagga
tccatccagtcctcgcttgaaaccacgctgaacactttcaaagccacgcttaatacaatg
gtggatgattttctggctcaaatcaacaacgccttcaatactcgagaattgaagaactcg
atgcgcgggttctttggttcagctttagactacgatgtctacaggcagtacttcggctat
ggtttgatgggcattttctccttcataccactgcttttggttggtggaatgctttgtgga
tgctgttgtaagaagaatgtaaaaccaaccaagcgtggagggtgcgagagttgtggagga
tgcttgctcattctagcggtcgccattatgttcttgataggagccctcttgatgttgcta
acaaccgtggcctttatgatcggaggaaactttgagaaaatctgtcaaacttttctcgac
atgtccattttccgtgattttgtggatgacgggggagtgcccggatttaacttgggacag
atgatcctgaacgatcccgcagcaaacatcagtttatacgggacacttctaggttgtaga
atgaataaagcccccttcgaattactatcgttggagaaaataattccaattgacaactat
ttgaactacagtcagtacatgggcgacatcgacacacaaatcaactccatcagtacggcg
gtggacctctcgtcctttaaggtacttaccccggaaatgaacacggcgctgaacgacttc
aagaactctggcatctctagcatagatttcgccgccatcaataccacgctcgggcaaagt
acggtgacgattgactttaactcgatgatctctggaatggagtctattcgagaccaatgt
acgggaacctcgaggaacaactggattcagcacattacggatacgaaaacaattcgagac
acaacccttccagctgtagaaactgcaaaaacgaacttgcaaacctcggttggcaaacta
gaaggatccgttggaggcgtgacgactaaaattgatgacgtattggccactgctgccaca
gccgatagtcaaatccagaacaacgccacggctgtattaaatgatgtcgccttaacctac
aaaaaccttatcctcggctacattgattcttattttgctcgaactcgctctttgatatcc
aatgatctagcggcctgtctgccattgtggaatctgtacgagtccttcacgaccatgctc
tgtagctacacagtcgatgctctcaatggattttggtttggcaccggctgggcactgatt
ctgtttgttcctacaattatcacctctgtaaagttatccaaatactaccgtcgaatgaag
gagtgcgagggatatgggagtgactcggaagatgacgatgattacagcgattctgacgac
gatgatgttttccaacccaggtacaaccaagtgtcgccaaaataa
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