Magallana gigas (Pacific oyster): 105333074
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Entry
105333074 CDS
T03920
Name
(RefSeq) prominin-1-A
KO
K06532
prominin 1
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
crg04147
]
105333074
04090 CD molecules [BR:
crg04090
]
105333074
Exosome [BR:
crg04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
105333074
CD molecules [BR:
crg04090
]
Proteins
105333074
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Prominin
Apolipoprotein
Fib_alpha
DotZ
Sec3_CC
Motif
Other DBs
NCBI-GeneID:
105333074
NCBI-ProteinID:
XP_011434185
LinkDB
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Position
8:11559825..11572254
Genome browser
AA seq
858 aa
AA seq
DB search
MALRSLFVVLLVVLAPPALAATITDTYGNVAYDNGTMSWADLPSGIPYKTNNVYDEGSLK
PLFSLVHGFINTIQPNAFPFSLIKQVLNGSFDISAQYMELVNYAMGFGICFVLGLLFIVF
LPLCGCCFCCCRCCGNCGGNGKQIYEENEGCKRMGLAQALFLMAVVMAASAGCVYMTNDR
FTVALQYADTSIANNLDDIMSYVNNTGMQFKYVAVDMYAIVADALIRDISGIGSVLATAI
FNVLNIDPVINAVISLDQSLSAIKTALDQVVTDQTALTSAANALDSALKTLKSDIDSTKS
GCNGQCSPNTVCDAIDTSVLAVSIDFSAIPDLSSTQSTIDSVIANNLTGLALTAKANLDN
MESTINSSTSSIQSSLQSTLDTFKTTLNTMVDSLLAQLSGAFDSSSLKADSKSFFETALT
YDVYRQYFGYGLMGLFTLIPVLNIVGICCGCLCGDGDAIPTKRGCGSSCGGCLMMMSVAL
MFLIGSMLMFLTTLTFMIGGNFEKICQTFLDLTIFKDFIDAGAISSISLGSMLLGDPNAN
ISIYKALLGCRQNKAPFELFSLDTLVPIDNYLNYSQYMGDIDTQINSISTSIDLSSFQIL
SKDLENTLNDFKNSGIGNLNFTVINDTLNQDLGNIDFNALIATMETIKSSCTGPTLTKWN
QHIADTETIRDTTYPAVTTAKTNLQTSMGSLESAVSGIVPKIDDVLTTAKAADDVIQNNV
SSLLTTVALSYKNQILGYIDSYIARTRYLIFFELAACLPLWNLYDSFTTMFCKYTMDALN
AFWFSIGWGLLFFIPVIVIAVKLSKYYRKMDKCEGYSEDDDDDDAESSGTPHDYDNYGRI
FKPNPEPPRYQYRKTTDF
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgaggagcctgtttgtggtactgttggtggttctagcaccaccggcgttagcg
gccactattacggatacttacggaaatgtggcctatgataatggcaccatgtcctgggca
gatctaccctcaggaatcccgtataaaacgaacaacgtctatgacgaaggatctctgaaa
cccctgtttagtttagtgcatggattcattaataccattcagccaaatgcgtttccattc
tcgttgatcaagcaggtgttgaatgggagttttgacatttctgcacagtatatggagctg
gtcaactatgccatggggttcggaatctgctttgtgcttggtctgctgttcatcgtcttc
ctgccgctgtgtggctgctgcttttgctgttgtcgttgctgtggcaactgtggaggaaac
ggcaaacaaatctatgaggaaaacgaagggtgcaagagaatgggacttgcgcaggcattg
ttcttaatggctgtggtcatggcagcctcggcgggctgtgtttacatgacgaacgaccgt
tttactgtggccctgcaatatgcagacaccagcatcgctaacaaccttgatgacatcatg
tcctacgtcaacaatacggggatgcaatttaaatatgtagctgttgacatgtatgccatt
gttgccgacgccctcattcgggatatctcgggcattggaagtgtattagcgaccgccatc
tttaatgtattgaatattgaccctgtgatcaatgctgtgatttcattggaccagtctttg
tcggcgattaaaactgcccttgatcaggtggttacggaccagaccgctttaacctccgcc
gccaacgcactagattccgccctcaaaacactgaagagcgacatcgactctaccaagtct
ggctgcaacgggcagtgtagtccgaacaccgtgtgtgacgcaatagatacgtcagtgcta
gctgtctcaatagacttctcggcgattcctgatctctcgtcaacacaaagtacaatcgac
agtgtaatagccaacaaccttacaggactagcgttgacggcaaaagcaaacctagacaac
atggaaagtacgattaactcatcaacgtccagcattcagtcttctctccagtccacgttg
gataccttcaaaacaacactcaataccatggtcgacagtcttcttgcacaactcagcggg
gctttcgattcctcttctcttaaagcagattcaaaaagttttttcgagactgctcttacc
tatgatgtgtacagacagtattttggatacgggttaatgggtctgttcacactgattcct
gtgcttaacatcgtggggatatgttgtggatgtttgtgtggagatggtgacgcaataccc
acaaaacgaggctgtggatcaagctgtggcggatgtctcatgatgatgtcggtggcattg
atgtttctgattggttccatgctcatgtttttgacaacattgacttttatgattggagga
aatttcgagaagatttgccagacatttttggatttgaccattttcaaagacttcatagat
gctggggctatttcctctatttcccttggatcaatgttgctcggagatcccaatgctaat
ataagcatttacaaagctttactcggttgccgacagaacaaagccccttttgagctgttt
tctttggatacactggtgcccattgataactacttgaactacagccagtacatgggtgat
attgacactcagatcaacagcatctccaccagtatagacctgagcagtttccagattctg
tccaaggacttggagaacacgctgaatgattttaaaaattccggaatcggaaatctgaat
ttcacagtcatcaatgacaccctgaaccaggatcttggtaacattgacttcaatgccctg
attgcgacgatggagaccatcaagagttcatgtaccggccctaccctgacaaaatggaac
cagcatattgcagacacagagacgatacgggacacaacctatccggcggttactacggcc
aagacaaatcttcaaacttccatgggatctctcgagtctgctgtgagtggaattgtgcca
aaaatagacgacgtattgacaacggcgaaagccgcagatgacgtcatacaaaataatgtg
tcgagtctgctaacaacggtagctttgtcatataaaaatcagattttgggatacattgat
tcttacatcgctaggaccagatacctgatattctttgaactggctgcctgtttacccctt
tggaacctctacgattcctttacgaccatgttctgtaaatacacaatggacgcactgaat
gcgttttggttcagtatcggctgggggctgttgttctttatccctgtgatcgtgatcgct
gtgaagctgtccaagtactaccggaagatggacaagtgtgaggggtacagcgaagatgac
gacgacgacgacgccgagtcctcgggaactccgcacgattacgataattatggacgcatt
ttcaaaccaaatccggaacctccacgctatcaataccgcaaaacgacagatttttga
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