Magallana gigas (Pacific oyster): 105333210
Help
Entry
105333210 CDS
T03920
Name
(RefSeq) protein cycle isoform X3
KO
K02296
aryl hydrocarbon receptor nuclear translocator-like protein 1
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
crg03000
]
105333210
Transcription factors [BR:
crg03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
105333210
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAS_11
PAS_3
PAS
HLH
PAS_9
bHLH_IRO3
PAS_4
Per3-like_PAS-A
bHLH_NPAS4
PAS_2
bHLH_NCOA
bHLH_SAC51
bHLH_INO2
PAS_8
bHLH_HIF1A
HAUS-augmin3
Motif
Other DBs
NCBI-GeneID:
105333210
NCBI-ProteinID:
XP_034328763
LinkDB
All DBs
Position
5
Genome browser
AA seq
683 aa
AA seq
DB search
MDSTPDFNLFDNLFLPPDQGSLMEPSLPGLDKIPGGIGPYLNHHRKRGSVDWETTSPTMD
TNDDDSFMDFDHRKYNSKAKNSMMDPQSGNDRQNHSEIEKRRRDKMNAYITELSSMLPMC
NAMNRKLDKLTVLRMAVQHLKSLREGAAMSIPEARPSFLSDDDLKHLILEAAEGFLFVVS
CDRARILYVSESVRNILNYTRLDLIGQSLLDYLHPHDINKVKEQLSASDVYPRERLIDAR
TMMPVKTEMIRRPTYLCSGARRSFFCRMKSGSSMSYLGLKSEKEMDLELCSRKKKSDRKS
FTVIHCTGYLKSWPSSSLDMKEQDDSEDNCDLSCLVAVGQIKTSCDKKIIDRDSNINVRP
IEYVSRMSIDGKFTFVDQGATILLGYLPQELLGTSVYEFYHQEDIASMSDIHRKVLKSKE
KVKTNVYRFKIKDGSFIHLRSECFSFRNPWTKEVEYIVSTNTFVPEQEVTSSGQSVDAGS
EVMDSSNNWEFKDDNQSTSGEKKKSEAGAVAMGTKLGAGRIGRQIAEEMIEMQRGFNTTL
ADSTNSVPVASPAAIPGKHFGLTNGLAVKVPVPLSEPPVATATEVAVSSEVAATLASQVA
VTRKNGLTVPTQSTSTAGSVASTSAETNLIEGVIAEQESTENETGQSSEHGNDEAAMSII
MSLLEADAGLGGPIDFNDLPWPL
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atggattctactcctgacttcaacctctttgacaatctgtttctaccaccagaccaaggc
agcctgatggaaccctccctgcctggactggacaagattccagggggcataggtccatac
ctgaatcaccaccggaagcgggggtccgtagattgggagaccaccagcccaactatggac
acaaacgacgacgattccttcatggatttcgatcacagaaaatataactccaaggcaaaa
aatagtatgatggatccccagtcaggcaatgacaggcagaaccacagcgagattgagaag
agaaggagggataaaatgaatgcgtacatcacggaattatcctccatgctgcccatgtgt
aatgctatgaatcgaaagctggacaaactaacggtccttcgaatggcagtgcagcattta
aagtctttaagagagggtgctgctatgtccattcctgaggccagaccctccttcctgtct
gatgatgatctcaagcatctcattctagaggcagccgaggggttcctgtttgttgtaagc
tgtgacagagccaggattctctatgtctccgagtcagtacgcaacattctcaactatacc
aggcttgatttgattggtcagagcctgctggattacctccacccccacgacatcaacaaa
gtcaaagaacagctgtctgcctccgatgtttatccaagggagcggctaattgatgctaga
acaatgatgccggtaaagacagagatgatacgacgacctacttacctctgttctggagcc
aggcgctccttcttctgtcggatgaagtccggcagttccatgtcatacctcggactcaaa
tccgagaaagagatggacctggaactatgtagtcggaagaaaaaatcagacaggaagtcc
ttcactgtgatacactgtacagggtacctcaaatcctggccctcctccagcctggacatg
aaggagcaggatgactcggaggataactgtgatttaagttgtttagtggcagtaggacaa
atcaaaacgtcgtgtgacaaaaaaatcatagacagagacagcaatatcaatgtccgtcct
atagaatacgtgtcgcggatgagtatcgatggcaagtttaccttcgttgatcagggagcg
acaattctgctaggatatctacctcaagagctgctagggacatctgtgtatgaattctac
catcaggaggacatagccagcatgtcagacatacatcgaaaagttttaaaatccaaagaa
aaggtgaaaacaaatgtctacagatttaagataaaggacggatcctttattcacttgagg
tcggaatgctttagtttccggaatccatggaccaaagaagtggagtacatcgtatcaacc
aacacttttgtcccggaacaagaggtcacaagttcaggtcagagtgtagatgccgggtca
gaggtcatggacagcagcaataactgggagtttaaagatgataaccagtctacctcaggt
gagaagaaaaagtctgaggcaggagctgttgccatggggaccaagctgggtgctggcagg
atagggcgacagatagctgaggaaatgatagaaatgcagaggggctttaacacaacgctg
gcagatagtacaaactctgtccctgttgctagcccagcagccattccgggaaaacatttt
ggattaacaaatggacttgctgtcaaagttccagttcctttatctgaacccccagttgca
acagcaacagaggttgctgtgtccagtgaggttgcagcaactttagcgagccaggtggct
gtgacgagaaagaacggcttgactgttcccactcagtctacctccacagcaggatcagta
gccagtacttcagcagagactaacctgatcgagggtgtcatcgccgagcaagaatcaacg
gagaacgagacgggacagagtagcgagcacggcaatgacgaagcggccatgtcgatcatc
atgagtctactcgaggctgacgcaggtctcggaggacctattgactttaacgatctcccc
tggcccctgtaa
DBGET
integrated database retrieval system
