Magallana gigas (Pacific oyster): 105333344
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Entry
105333344 CDS
T03920
Name
(RefSeq) S1 RNA-binding domain-containing protein 1 isoform X1
Organism
crg
Magallana gigas (Pacific oyster)
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Gene cluster
GFIT
Motif
Pfam:
Tex_YqgF
HHH_3
Tex_N
S1
HHH_9
Tex_central_region
HHH_7
YqgF
DUF5734
S1_2
HHH_6
DUF2576
Motif
Other DBs
NCBI-GeneID:
105333344
NCBI-ProteinID:
XP_034326136
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Position
6:28491159..28518300
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AA seq
789 aa
AA seq
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MSDFTPSWVLEELIGERTQLKQWAVKNVVQMLHDGATIPFIARYRKEQTGGMEVDKLREI
KNQAEELKVVQQKIFTVLTGLQKQNKLNTQIQRSIRQAESLTEVEDLYAPYKPGHKGTLA
ERARALNLEPVAMACIQNSGNVNLNKHIKLGVKGLSSEKEVQTGIQHIIADLIHRDDSVI
KVVKDLCKTNGILIECSKFVTSKKLSAKTLEKAQKAQQSSYKFENYFEFKGSSRTIRPHQ
VLAINRGEEQKILTVKYTIPESIRQKFNYTAEKKYLRFECKGSVRGLMLRAIDDCWSRLV
QPQIIRQIRFELTKSAQKSSIDVFSSNLRNLLLSAPVKSHSILGIDPGFRNGCKCAVISQ
TGQVLYTDVVYLHFAPEMKKKLQETVKKFRCKYIALGNGTACRETEKVLTDVVKNSSAKY
CIVKEDGASIYSCSDLAKAELPDLDLTLRGAVSIARRLLDPLAELVKIEPKHIGVGQYQH
DIPESQLKVALDSVVEECVSFVGVDLNTGSEALLRRVAGLNLTKAKSVVERREKKGPFTN
RNQLKLIKGFGEKSFQQCAGFLRVNHSNFVVDVTEDMPESPSLAIGDQETILVSDDEQPS
KGKKRKIKTVGGSKAVKKRCTSSDADPLDETWIHPESYDISYKLMDHIGIKPSELGRDSA
IERVKAYKKNHSVQELNQDIQVGEPTIQLILDAFLQPCGYDIREKEMQPLFKEGIRDIAS
LREGTRLTGKVTNVTHFGAFVDIGVGRDGLIHNSNMKRTDLQLGHRVEVKVIKMDKAGNR
IGLNLEHKL
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgtccgattttacaccttcgtgggtcttagaagagctaatcggtgaaagaactcaactt
aaacagtgggcagtgaaaaatgtcgtacagatgcttcatgatggagccactattccgttt
attgctcgataccggaaggagcagacagggggaatggaggtggataagcttcgcgagatc
aaaaatcaggcagaggaattaaaggttgttcaacagaagatctttacagtgttaacgggc
ctacagaagcaaaacaaacttaacacgcaaatccagagaagtattcggcaagcagagtcc
ctaactgaagtggaggatttgtatgcaccatacaagccaggtcataaaggaacactagcg
gagagagcgagagccttaaatctggaacctgtggccatggcctgcatccagaactcaggg
aatgtgaacctcaacaaacacattaaattgggtgtcaagggactgtcatcagagaaagaa
gttcagacaggaatacaacatatcatagcggacctgattcaccgagatgacagtgtcatc
aaagttgtcaaggatctatgtaaaacaaatgggatattgattgagtgcagcaaatttgtg
acctcaaaaaagttgagtgccaaaaccttggagaaagctcaaaaggctcaacagtccagt
tacaagttcgaaaattattttgaattcaaaggttcctccagaactatcagaccgcatcag
gtactggcaataaacagaggtgaggagcaaaaaatccttacagtgaaatataccatccca
gagagtatacgacaaaagtttaattatactgcagagaaaaagtatttgcgatttgaatgt
aaaggttcagtcaggggtttgatgctgcgagcgattgacgactgctggtctagacttgtc
caacctcagatcatcagacaaatcagatttgagcttactaagtctgcccagaaatcctca
attgatgtgttttcttccaatctacgcaatctgcttttgtcagctcctgtaaaaagccat
tccattcttggaatagatccaggctttcgaaatggctgtaaatgtgcagtcatttctcag
acaggtcaagttctgtacacagatgtagtgtatttacactttgctccagagatgaagaaa
aaattgcaagagacagtaaaaaaattcagatgtaaatacatagctctgggaaatggaaca
gcttgcagggaaactgaaaaagtcttaacagatgttgtgaaaaattcatcagctaagtat
tgcattgtcaaagaagatggagcttccatctacagctgctcagacctagcaaaagcagaa
ctccctgaccttgaccttaccttgagaggcgcagtttccattgccagacgattattggac
cccttggctgaattggtgaagatcgaacctaaacacataggtgtaggccaataccagcat
gacataccagagagtcagctgaaagtggcactggactcggtggtggaggagtgtgtcagc
tttgtgggggtggatctaaacacgggcagtgaggctctgttaaggagagtggcgggatta
aatctgacaaaagccaagagtgtggttgaaagacgcgaaaaaaagggtcctttcaccaac
agaaaccagctgaagttaattaaaggatttggggaaaaatcttttcagcagtgtgcagga
tttctacgagtaaatcactcaaattttgttgtagatgtgacagaggacatgcctgaatcc
ccatcactggcaattggagaccaagaaacgattttagtttctgatgatgagcagccctcc
aaaggaaagaaaagaaaaatcaaaactgtcgggggttcaaaggctgtcaaaaagcgttgc
actagctctgatgcagatcctctggatgaaacttggattcatccggagtcttatgacatt
tcttacaaattgatggatcacataggaataaagccatccgaacttggtcgagacagtgct
attgaacgggtcaaggcatataaaaagaatcatagtgtgcaagaattaaatcaagatatt
caagtgggagagcctacaattcagcttatattggatgcatttcttcagccttgtggatat
gacatcagagaaaaagaaatgcagcccctgtttaaggagggaattcgagatattgctagc
ctgagggagggtaccagactgactgggaaagtgaccaatgtgacccattttggagccttt
gtggacataggagtgggcagggatggacttattcataattccaacatgaaaaggactgat
ttacaattaggtcatagagtggaggtcaaggtcattaagatggataaagcaggaaatagg
attggtttaaatctagagcacaagttgtga
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