Magallana gigas (Pacific oyster): 105333401
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Entry
105333401 CDS
T03920
Name
(RefSeq) polycomb protein SCMH1 isoform X1
KO
K11461
polycomb protein SCMH1
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
105333401
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
crg03036
]
105333401
Chromosome and associated proteins [BR:
crg03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
PRC1.4 specific proteins
105333401
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GFIT
Motif
Pfam:
MBT
SLED
SAM_1
SAM_2
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
105333401
NCBI-ProteinID:
XP_065926823
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Position
9:10909629..10926709
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AA seq
594 aa
AA seq
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MKYFLHCCKIKSNRMAVTPTGKGRSYQYDSQGSFDWEEYLKENDAIPAPQSCFKQSVEPP
VNEFKLHQKIEAVDPRNLTSICVATVVGMIGPRIRLRLDGSDNTNDFWRLVDSSDLHPVG
YCEKTGKLLQPPLGFCKNPTLWPSFLQKTLTGAERSPENCFKKEPSNPKTNEFKIGMKLE
AVDRKNPQLICPATVGAVKGEEVHVTFDGWRGAFDYWTKRDSRDLFPVGWCALSGHPLQP
PGQKGTAQVKSKSREPSVSQSAHSPGNQSNASKSSSTSSSGPTSPNLPHDRSVSPLQAES
PAITVTEPDTSSSTTATDKVTIYVNHNCSCGILLNPKKIEQLPNQFGPGPYQKVLREVIQ
SCVDCAKHEKQVYNFIQDGNGKIVITANQGNKTHTKRLPPIDKVSDVWRFLEKSLEELGC
CENLFASQPLHGFCAQCNREKKTGSDFKKPLETEEYENRTSINRALKRRWSTDSLENQSQ
KAAAAQQKIRRYSAYDSAEGEDVLSSSSTTDSRPPRKLSADPNDWTIDDVVQYISEVDSS
LATHSEAFRKHEIDGGAFMLLNSDMMMKYLGLKLGPVLKLSNIIEKLKGKKSSH
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgaagtacttccttcattgctgtaagataaaaagcaacagaatggcagtcacacccaca
ggaaaaggaagatcttaccagtatgattcacaaggaagctttgattgggaagaatacctc
aaagaaaacgatgcaataccggctccccagtcttgtttcaaacagtcagtggagccacca
gtcaacgagttcaaactccatcagaagatcgaggcggtggaccctcgaaacttgacctca
atttgtgttgcgacggtggtggggatgatcggtccacgcatccgcctgcgactagacggg
agtgacaataccaacgatttctggaggctggttgactcgtccgatctccatccagtgggt
tactgtgaaaagacaggaaaactgctacaacctccattaggcttctgtaaaaaccccaca
ctatggccttctttcctacagaagacattaacgggggcagagaggtcaccagagaactgt
ttcaagaaggagccctccaaccccaaaaccaatgaattcaagatcgggatgaagctggag
gcggtggacaggaagaacccccagctgatctgtcccgccaccgtaggggcagtcaagggg
gaggaggttcatgtcacatttgatgggtggaggggggcgttcgactactggaccaagagg
gactccagggacttgtttcctgtggggtggtgtgcactgagtggccacccgctccaaccc
ccaggtcagaaaggtacagcccaagtgaagagcaagtcccgggaaccctcagtatcacag
tctgctcactctccaggaaaccagagcaatgcttccaagtcttcttccacatcatcctcc
ggcccgaccagtcctaacctcccccacgaccggtccgtgtcccccctacaggccgaatcc
cctgccatcactgtcactgaaccagataccagctcctctaccacagccactgacaaagtt
acaatctatgtaaaccacaactgcagttgtggaatcctactcaatcctaagaagatagaa
cagcttccaaatcagtttggaccgggtccttatcagaaggttctaagggaggtaatccag
tcctgtgtggattgtgccaagcatgagaaacaggtgtacaacttcattcaggatggcaat
gggaagattgtcattacagcaaaccagggcaacaagacccacacaaagcgactgcccccg
atcgacaaggtgtcggacgtgtggcggttcctggagaagtccctagaggagcttggctgc
tgcgagaacctgtttgccagtcagccattacatggcttctgtgctcagtgcaacagggag
aagaagacaggtagtgactttaagaagcccctagaaacagaggagtatgagaatagaacc
tccatcaacagagctctgaagaggaggtggtcaacagactccctagaaaaccagtcccag
aaagcagcggccgctcagcagaagatcaggaggtactccgcctacgactcagctgaaggt
gaggatgtattgtcttcgagttccacaacagacagtagaccccctcgtaaactatccgcg
gaccccaatgattggacgattgatgatgtggtccaatacatctctgaagttgattccagt
cttgccacgcattcagaggcatttaggaaacatgaaatcgatggtggagctttcatgttg
ctgaacagtgacatgatgatgaagtacttaggactaaaactagggcctgtcctgaaactc
agcaatatcatagagaagctgaagggcaagaaaagttcccactaa
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