Magallana gigas (Pacific oyster): 105333412
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Entry
105333412 CDS
T03920
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase MINDY-4
KO
K22647
ubiquitin carboxyl-terminal hydrolase MINDY-3/4 [EC:
3.4.19.12
]
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
crg04121
]
105333412
Enzymes [BR:
crg01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
105333412
Ubiquitin system [BR:
crg04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
MINDY
105333412
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MINDY-3_4_CD
FOP_dimer
Motif
Other DBs
NCBI-GeneID:
105333412
NCBI-ProteinID:
XP_065927260
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All DBs
Position
9:35795732..35810164
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AA seq
715 aa
AA seq
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MDPSYTEVIAASLVREFLSRKGLKGTLQMMDHEMPRGDNAISNRQLLMRELHIEKLMKRN
KEMVEPLRTMLEIITKYFLELTKPGDLILVPQPQDSDSMSSSQPTRNNDASNLINPAVDR
PTSSSYGSGGKSRTGVRNGSQDLVIDDNVEGETLLGSGKAGLMDREDPKDSFPTPLRLQG
RPISAKKKGMSGPITSNLEDTGRNRKLNKPRPLTSGSRKIILDSPELTSEPRRSSVNEDR
LSGTTGSVVGRDRKPSIQDVLAVEDTKPSKPKSASGRRQASMEEDFPEYSVDKSSIANRP
PTRGSQRPSSNHSVASKLSTKVGDLEFGDCDDLDSDLADLDLGPKLSVNRPVQNLIDARP
ITLQTAINLKTLIFGSATQCFNDEWRYQSLVFCDLPKLQYGIVQKKGGPCGVLAAIQACV
LQELLFGDCKIPLKRFGDPTHEERSQALATALAKIFWRAGENKTAVVTIGSGKAVFQGGA
PKYRADDLTETLMLNHFKSYEDLLGFLKQNVHHFMTDGTGGVILTLYSVIFSRYIDQVRE
DMDEPTGKLMGAHGYCTQDMVNLYLTGKANSNVFNDKIELDSGTGSDVTILKGVTGRSNI
GLLSLFEHYKSCQVGTYLKTPKYPIWVVCSESHFSVLFSIKKELISDWKAERRFDLYYYD
GLARQQEEIKLTIDTVDMGFKTPSSEEDLVPPLEHCIRTKWSGANVDWNGTEPLL
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atggatccttcatacactgaagttatcgcagcatctcttgtacgagaattcctcagcaga
aagggtctgaagggaacactacagatgatggaccatgaaatgccaaggggagacaatgcc
attagtaacagacaactgctgatgagagagctacatattgagaagctgatgaagagaaac
aaggagatggtggaaccattaagaacaatgctagaaataataaccaaatacttcttagag
ctgacaaaaccaggtgatttgattttggtgccccagccccaggattctgactccatgtct
tcctctcagccaacccgcaataacgatgcatctaacttaataaacccagctgttgataga
cctacctcttctagttatggctcaggaggaaagtcaagaacaggtgtacgaaatgggtcg
caggatctggtcatagatgacaatgtggagggggagacactcttggggtcaggcaaggct
ggcctgatggacagggaggaccccaaagactcattccctaccccactgagactccaaggc
agacccatcagtgccaagaagaaaggaatgtctggaccaattacaagtaatctggaggac
actggaagaaaccgcaaactaaacaaacctagacctttgacctcagggtcccgcaaaata
attctagacagccccgaattgacctctgaacctagacgcagttcagtgaatgaggacaga
ctttctggcacaacaggaagtgtagtgggccgtgacaggaagccgtccattcaggacgtg
ctggctgtggaagacaccaaaccttcaaaaccaaaatcagcgtcagggagacgccaggca
tccatggaggaggatttcccagaatacagtgtggacaaatcgagtatagcaaacagaccc
ccaactcgggggagccagagaccatcctccaaccattcagtggcatcaaaactttccaca
aaagtaggtgaccttgagtttggtgattgtgacgaccttgactcagatttagctgacctt
gacctgggaccaaagttatctgtgaaccgtccagtacagaacctgattgatgcccgccca
ataacactacaaactgccataaatttgaagaccctgatatttgggtcagctacccagtgt
ttcaatgatgagtggaggtaccagagtctggtgttttgtgatctcccaaagcttcagtac
ggaatagtccagaaaaagggagggccctgtggtgtgttggctgctatacaggcttgtgtt
ctacaggaactgctgtttggggattgtaaaataccattgaaacgattcggggatccaaca
catgaagagagaagtcaagccctagctacagctttggccaaaatcttctggcgagcagga
gagaataaaacagcagtagtcaccataggttcggggaaagctgtgtttcagggaggggca
ccgaagtaccgagcagatgacctgacagagactctgatgctgaatcacttcaagtcctat
gaagatctgctcggctttctgaaacagaatgtacatcatttcatgacggatgggacgggg
ggcgtcatattgacgctgtactctgtcatcttctctcgatacattgaccaagttagggaa
gatatggacgaaccaacaggaaagctgatgggagctcatgggtactgtactcaggatatg
gtcaatttgtacttaactgggaaagccaattctaatgtgttcaatgacaaaatcgagctt
gactcaggtacaggaagtgatgtcacaatccttaaaggggtcacagggaggtcaaatata
ggactgctttctctgtttgaacattacaaatcctgtcaggtggggacttatctaaaaacc
ccaaagtatccaatctgggtggtgtgcagtgagagtcacttcagcgttttattctccatc
aagaaggagcttatcagtgactggaaggcggagaggcgatttgatctgtattactacgac
ggcttagctcggcagcaggaggaaatcaaactcaccattgatacagtagatatgggattc
aagacgccatcttctgaagaggacctagttcctccactcgaacactgtatcagaaccaaa
tggtctggagctaatgttgactggaatgggactgaacctcttctataa
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