Magallana gigas (Pacific oyster): 105333460
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Entry
105333460 CDS
T03920
Name
(RefSeq) E3 ubiquitin-protein ligase Siah1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg04120
Ubiquitin mediated proteolysis
crg04137
Mitophagy - animal
crg04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
105333460
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
105333460
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
105333460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
crg04121
]
105333460
Enzymes [BR:
crg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105333460
Ubiquitin system [BR:
crg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
105333460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf_C2H2_6
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
105333460
NCBI-ProteinID:
XP_011434753
UniProt:
A0A8W8N4S8
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Position
5:complement(9811412..9818797)
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AA seq
289 aa
AA seq
DB search
MSLSRQPSSSGKQPRQIHNGGSSNVTTTQSVLAAAGSSNSDLASLFECPVCFDYALPPIT
QCQSGHIVCQPCKQKLNICPTCRGPLGNIRNLAMEKVATTVMFPCKYSSSGCPVTLLHTD
KQEHEETCEYRPYCCPCPGASCKWQGSLEQVMGHLMQQHKSITTLQGEDIVFLATDINLP
GAVDWVMMQSCFGHNFMLVLEKQEKLEGQQMFYAIVQLIGTRKQAENFAYRLELNGHRRR
LSWEATPRSIHDGVQSAIVASDCLVFDTNIAQLFADHGNLGINVTISMC
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgagcctcagtcgtcagccgtcttcctcgggtaaacagccccgacaaattcacaatggg
ggatcctctaatgtaaccactacacaatcagtcttagctgctgcggggagcagtaactca
gacctggcctccctctttgagtgcccggtctgctttgactatgctctccctcccatcacc
cagtgtcagagtggccatattgtctgtcagccgtgtaaacagaaactgaacatatgtccc
acgtgtcgtgggccattaggtaatataaggaatcttgccatggagaaagtcgccacaacg
gtgatgtttccctgtaaatattcctccagtggttgtccggtcactctcctacacacagac
aaacaggagcatgaggagacctgtgaatatagaccgtattgttgtccctgtcccggagct
tcctgtaaatggcaggggtcactggagcaggtcatgggtcatctcatgcagcaacacaag
agcatcaccaccctccagggtgaagacattgtgttcctggctactgacataaatctacca
ggggcagtagactgggttatgatgcagtcttgttttggtcacaattttatgttagtcctg
gaaaaacaggaaaagttggagggacaacaaatgttttatgccatagtacagctgattggt
acacgcaaacaggccgagaactttgcttacagactggagctgaacggccatcgtcggcgg
ctgtcttgggaggccactccgcgaagtatccacgacggagtccaatctgccattgttgcc
agtgattgtctagtgtttgacacaaacattgcccagttgttcgctgaccatggtaacctt
ggcatcaatgtcaccatatccatgtgttga
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