Magallana gigas (Pacific oyster): 105333539
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Entry
105333539 CDS
T03920
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 1 isoform X2
KO
K05038
solute carrier family 6 (neurotransmitter transporter, glycine) member 5/9
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
105333539
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
crg02000
]
105333539
Transporters [BR:
crg02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
105333539
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Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
105333539
NCBI-ProteinID:
XP_011434867
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Position
2
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AA seq
661 aa
AA seq
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MCNMLESAKMEKGETDSSRSRSSDDSIDMEKKQLKERDGWKGRLDFIMTCVGYAVGLGNI
WRFPYLCYKSGGGAFFIPYVFFLVMCGVPLFFMEASYGQFSSLSPISIWRICPLFKGVGV
GMVMVSAIVCIYYNVIVAWTLYFLYMSFRAVLPWSTCDNEWNTVNCVVDTGDRLPQPSPP
TNATNSSSLFNSTYLVNSTLFNQTLFGNMSAALSAAGNATAVLSGKKMSASEEFWTRHVL
EITDGINNPGTIRWQLLIGLMLAWVFVFLCLFKGVNVLGKVMHFAAPFPYLVLLVLLIRG
VTLPGAVNGIKFYIFPKWEKLADYQVWGDAALQIFYSVGMAWGGIITMASYNRFSNNVYR
DAMLVPIINCATSIFAGFVIFAILGFMAHSADTTVEKVVSQGPGLTFVAYPEAVAKLPIS
PMWAVLFFLMLFTIGLDSQFGMVETCISAFMDEYPHLLRTKRTLISFLACLFEFLMGLPC
ITQGGIYVLQIMDWYCASFSLMLISLTECVAIAWIYGTDRFYKDIELMIGFRPSPIWHYM
WKYITPSIILGIWLFSVITLGPVTYDGKSYPTWALGFGWCLGVASMLPIPILAFKSMLST
EGTCSQRWKKLTTPLESWGPSQPEDREKYLTSLRKCKELEEISHSPHMRTNDDVATPFLS
T
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgtgtaatatgttagagtctgcaaagatggagaaaggagaaacagattcttcaagaagt
cgttcgtctgatgattccattgacatggagaaaaagcaactaaaagaaagagatggttgg
aagggccgcctggattttatcatgacttgtgtcggatacgccgtgggactggggaatatt
tggagatttccgtatctgtgttacaaaagtggtgggggtgcgtttttcatcccttatgtg
tttttcttggttatgtgcggagtccctttgtttttcatggaggcgtcttatggccagttc
tctagccttagccctattagtatatggaggatatgcccattattcaaaggtgttggggtg
ggtatggtgatggtatcggctattgtgtgtatctactacaacgtaatagtggcctggacg
ctgtatttcctgtacatgtctttccgagcagtactgccatggagtacttgtgataatgaa
tggaacactgtgaactgtgtggtggacactggggaccggctcccccaaccgtcaccacct
actaacgccaccaatagttcctctctctttaacagtacctatcttgttaatagtaccctg
ttcaaccagacgttgtttggaaacatgtctgccgctctgtctgccgccggaaatgctaca
gcagttttgtcgggcaagaaaatgtctgctagtgaagagttttggacacgacatgttttg
gaaatcacggacgggatcaacaaccctggaaccattcgttggcagctgttgattggttta
atgttggcctgggtgtttgtttttctgtgtttatttaaaggggtcaatgttcttggaaag
gtgatgcattttgccgcacctttcccctatctagtcctgttggtactgctaattagaggg
gtaaccctgccaggagccgtcaacggcattaaattctacatcttccccaagtgggaaaag
ttggcggattaccaggtttggggagatgcagctcttcagattttctactcagtggggatg
gcttggggtggcatcatcacgatggcaagctacaacagattcagcaataacgtgtacagg
gatgctatgctggtgccgatcatcaactgcgcgactagtatttttgcagggttcgtgata
ttcgctattctgggcttcatggcacactcggcagatacaacagtagaaaaagttgtcagt
caaggccctggtttgacatttgtggcttaccctgaagcagtggctaagctgcccatctcg
cccatgtgggcagtgctgtttttcctgatgttattcaccattggtttggacagccagttc
ggtatggttgaaacctgcatttctgcatttatggacgaatatccacatctgttgagaact
aagaggacgttgatatcatttctggcttgtctctttgaattccttatgggtcttccttgc
atcacccagggagggatctacgtcctgcagattatggattggtactgcgcaagtttctca
ctgatgctcatctccctgaccgagtgcgtagccattgcatggatctatggcacggatcga
ttttacaaggatattgaattgatgattggattcagacccagtcccatttggcactatatg
tggaaatatattacaccgtctataatcttgggaatttggttatttagtgtcatcacgtta
gggccagtcacatatgacggaaagagctacccaacatgggctctgggcttcggttggtgc
ctaggtgtggcatccatgctgcccatccctatccttgctttcaaatcaatgctttctacg
gagggcacctgtagtcagagatggaagaaattgaccactcctttagaaagctgggggccg
agtcaaccagaagatagagagaagtacctaacgtccttgagaaagtgcaaagaacttgag
gagatttctcattcaccgcacatgcgtacaaatgacgatgtcgctacaccctttctctca
acgtga
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