Magallana gigas (Pacific oyster): 105333583
Help
Entry
105333583 CDS
T03920
Name
(RefSeq) transient-receptor-potential-like protein isoform X1
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
crg04040
]
105333583
Ion channels [BR:
crg04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
105333583
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_3
Ank
Ank_4
PKD_channel
YVC1_C
Motif
Other DBs
NCBI-GeneID:
105333583
NCBI-ProteinID:
XP_034301106
LinkDB
All DBs
Position
2:43007252..43034956
Genome browser
AA seq
928 aa
AA seq
DB search
MLAGSQPHTRCYQTRSPVIMPLEPLKRSQMNNTQERVFLEAVERGDKPTVIRCLQGPDPV
NVNCTNMLGRSAIQIAVDNENVELVEILLQQDGVKIGDALLYAIREGVYRIVEMLIDHPS
ISLEMLGPDWSKTKRRGEESSDYSSDICPIILAAHCNQFEILQLILLRGANIEFPHMLSC
SCQGCREKVNEDSLRHSLFRINSYKALASPAWISLTSTDPILTAFKLSWELQKLALTENE
FKDTYIQLSDQCKKYACDLLDQCRSSEEVMAVLNRSSDSEDEREEEEELDLTSFPEKLTL
SRLKLALKYEQKQFVSHPHCQQLLTSIWYEGLPGWRKRNGLTKFLLCMGLILIAPFMAVY
YLIFPCSKIGQLLRSPFMKFLYHSTSFGVFLVLLVLCSTNISNPNDRGNTRGPPPSELEW
LIFLWVMGFVWAECKQLWDEGLKAYTRQWWNWLDFMMLSLYLATFSLRFVAYVQIESGRY
GDREISRKDWPIVDPTLLAEGLFAVANVFSFSRIIYLAQANQHLGPLQISLGCMLIDIGK
FLFIFFLVLTSFACGMTQLYWYYYKSRVPEDPVAFVSLGESYATLYWSLFGITAKHDLKI
QNGQTFTEMLGRLMFMLYHCMAIIVLINMLIAMMSNSFQNIENHADMEWKFSRSKLWMGY
FDEGSTLPSPFNLIISPKSIYYAASFFKNFLSSCINKSRPFTRSKRRTSISSVKPVPTTL
PIRDFVEINTTEAVIQTRINIKSESLPQEVSKIKYQPPLQNQTSIRSNDENHYQDIMRRL
VSRYIHQFKKDRQLDGVNEDDLLEIKQDISSLRFELRADRKRESCLAVSLLQSTKQEILS
IIQEFNRASYPQQTVGYQGHSPQSNSQVRGHISDRGHMLSSNDLEQLKEDIISGICSRLQ
DNLQPFQGVERLPSIDSDLYTTHLYTQL
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atgctggctggcagtcaacctcacaccaggtgctaccagactcggagtccagtcatcatg
cccttggagccactcaaacggtcacagatgaacaatacacaagagagggtatttctggag
gcggtagagcgaggggacaaacccacggtcatacggtgcctgcagggacccgaccccgtc
aatgtcaactgcaccaacatgctgggacggtccgcaattcagatcgctgtcgataatgaa
aacgtggaattggtcgagattcttttgcagcaggacggagttaagattggtgatgctctt
ttgtatgcaatcagagagggggtttacagaatagtggaaatgcttattgatcatccgagc
atctctttggaaatgcttggacctgattggtctaaaactaaacgaaggggggaagaaagt
tcagactactcgtcagacatctgcccaattatattggcagcccattgtaatcagtttgag
atccttcagttgattctcctcagaggggcaaatatagagtttccccacatgctgtcttgc
tcgtgtcaaggttgtcgggagaaggtcaatgaggacagtcttagacattccctgtttcgt
atcaactcctacaaagccttggccagtcctgcctggatatccctcaccagcactgacccc
atcctcacagccttcaagctgtcctgggaacttcagaagttggccttgacagagaatgag
ttcaaggacacttatattcagctgagtgaccagtgtaagaagtatgcgtgtgatctgttg
gaccagtgtcgcagcagtgaggaggtcatggctgttctgaaccggagctccgactcggag
gatgagagagaggaggaagaggagttggacttgacctctttcccagagaaactcaccctg
tccaggctgaagttggcactcaaatatgaacaaaaacagtttgtgtctcaccctcactgt
cagcaactgttgacctcaatctggtacgagggtcttccgggatggaggaagagaaatggc
ctgaccaagtttttgctgtgtatgggactgatcctaattgctccattcatggcggtgtat
tatctcatattcccatgcagtaagataggacaactactgcgcagtcctttcatgaagttt
ctgtatcacagcacttcttttggtgtgttcctggttttgttagtgctatgctccaccaac
atcagtaaccccaatgacaggggaaataccaggggaccccctccctcggaactggagtgg
cttattttcctatgggtgatgggctttgtttgggctgagtgcaaacagctgtgggatgaa
ggtctaaaagcatacacacgacagtggtggaactggctggactttatgatgctatcactt
tatctagcaacattttctttaagatttgttgcatatgttcaaattgaatcgggtagatat
ggtgacagagagatttctagaaaagattggcccattgtagaccctactctgctagcagag
gggcttttcgcagtggccaatgtatttagcttttctcgaatcatatacctggctcaggct
aatcagcatctcggacccctccaaatatcgctgggctgtatgttgatagatatcgggaag
ttcctgtttatattctttctggtcctaacctcttttgcctgtggaatgactcagctctac
tggtattattacaagagccgtgttcccgaggacccagtggcatttgtgtcgcttggtgag
agctatgctaccctatactggtcgctgtttgggatcactgcgaagcatgacctgaagatc
cagaatggccagaccttcactgaaatgctggggcgcctgatgttcatgttgtaccactgt
atggctataattgtgctcattaacatgttaattgccatgatgtcaaactcattccagaat
attgagaaccatgcagacatggagtggaagttttctcgctccaagctatggatgggttac
tttgacgagggatccacccttccatcccccttcaatctgatcattagccccaagtccatc
tattatgctgcatccttcttcaaaaacttcctcagttcctgcatcaacaaaagccgaccc
ttcaccagatcgaagcgacgaacctccattagcagtgtaaagcctgttcctacaacatta
cctatacgagactttgtggaaattaacacgacagaggctgtgattcagacaaggataaat
ataaaatcagagagcctgcctcaggaggtcagtaaaatcaagtaccagcctccactacaa
aaccagacaagtatcagatctaacgatgaaaaccattatcaggacattatgaggagactg
gtgagccggtacatccatcaatttaagaaggacagacagctggacggagtgaatgaggac
gacctgttagagatcaaacaagacatctcaagtctcagatttgagttaagagccgacaga
aaaagagaatcttgcctagctgtctctctattgcaaagtacgaaacaagaaatcctgtcc
atcatacaggagtttaacagggccagctacccacagcaaacagtggggtatcaaggtcat
agtccccagagtaattcccaggtcagaggtcatatcagtgacaggggtcatatgttgtct
tctaatgaccttgagcagttgaaagaggacataatcagtggaatttgttccaggttacag
gacaatttacagccttttcagggagtggaaagactaccatccattgactcagatctctac
acaacacatctgtacacacaactgtaa
DBGET
integrated database retrieval system
