Magallana gigas (Pacific oyster): 105333944
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Entry
105333944 CDS
T03920
Name
(RefSeq) procollagen galactosyltransferase 1 isoform X1
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg00310
Lysine degradation
crg00514
Other types of O-glycan biosynthesis
crg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
105333944
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
105333944
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
crg01003
]
105333944
Enzymes [BR:
crg01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
105333944
Glycosyltransferases [BR:
crg01003
]
O-Glycan biosynthesis
O-linked Gal type
105333944
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Anp1
Glyco_tranf_2_4
Motif
Other DBs
NCBI-GeneID:
105333944
NCBI-ProteinID:
XP_011435488
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All DBs
Position
2:39889622..39899542
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AA seq
601 aa
AA seq
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MGSWLTCLVISYCFLTLYRNEGNFVQGEDLAIKNASENNYKYAEPTVMIAILVRNKAHIL
PWFFGHLEKLNYPKNRISFWIRSDHNEDDSARMLSEWVDANKNVYHNIDLVIEDNKDKYE
DEIGPLHWSTKRFDKVIALRENALLAARRAWADYLFMLDADVVLENRNTLTQLIDAKQPI
IAPMLNASIGETYSNFWGGMDEMGYYKRVPGYFDILERKRLGVFEVPMVHTALLLDMHLM
ESDSFTYNKPEGYDGPHDDIIIFGLNVRKAGMVMHIMNTEYFGIVMVPLESHNTLEQESQ
HFDFILLEAIDANFIDEMKIGRQFPVDRKELSSSPFITTTDPTPSKLGFDQIYMINLLRR
PLRRERMYKAFRILGIEAKTVNAVDGKELNTTYLNELGVEMMKGYADPYHGRPLTMGEIG
CFLSHYFIWEDVVKNGYKKAIVFEDDVRFSPYFKTKLTRLMSEVEQNVKDWDLIYLGRKR
LHRNEEKVVDGTSHLVWPSYSYWTLSYIVSQQGAQKLLNQKPLGKMVPVDEYLPIMFNRH
PQNDWKSNFTPRNLITMSAEPLLVEPTHYTGEPNYISDTENSFVVKPEESLQEGKSSKEE
L
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgggaagctggctgacgtgtctggtgatttcttattgttttttaactttatatcgaaat
gagggtaattttgtgcagggtgaagatttagccataaaaaatgcctccgaaaataattac
aaatatgcagaaccgacggtaatgatagcgattttggtccgaaataaggctcacattctg
ccatggttcttcggacacttggaaaaactaaattatcccaagaatagaatatcattttgg
attagaagtgaccacaatgaggatgactctgcccggatgctcagtgagtgggtggatgcc
aataaaaatgtttaccacaacatagacttggtgattgaggacaacaaagacaaatatgaa
gatgaaattggtcctttacactggtctactaagagatttgacaaagttattgcccttaga
gagaatgctttgctagctgctagacgtgcctgggcggattacttatttatgcttgatgct
gatgttgttctggaaaatagaaatacacttacacaactgattgatgccaaacaacccatc
atagcccccatgctaaatgcaagcataggagaaacatattcaaatttttggggaggaatg
gatgaaatgggatactataagagagtccctggatattttgacattttggagagaaagcgg
ttgggtgtttttgaggttccaatggttcacactgcactccttttagatatgcatctgatg
gagtccgattccttcacctacaacaaacctgagggctatgatggccctcatgatgacatc
attatttttggtctcaatgtcagaaaagcaggaatggttatgcacattatgaatacggag
tattttggaattgtgatggttcctctagagagtcacaatacgttggaacaagaaagccaa
cattttgattttattctattggaggccatagatgcaaactttattgatgagatgaaaata
ggcagacaattcccagtggatagaaaagaactttccagttccccatttattacaacgaca
gacccaacaccatccaagctaggcttcgaccagatttacatgataaatttgttaagacga
cccttgagacgcgaaaggatgtataaagcatttagaattcttggtattgaagccaaaaca
gtaaatgctgttgatggaaaggaactcaatactacatacctaaatgaactcggagtagaa
atgatgaaaggttatgcagatccttatcatggaagacctctgactatgggggaaattgga
tgtttccttagtcactattttatttgggaagatgttgtgaagaatggttacaaaaaggct
attgtgtttgaagatgatgtccgatttagtccttatttcaaaacaaaattgacaagattg
atgtccgaagtagaacaaaatgttaaagattgggatcttatatatctagggagaaaacgc
ttgcacaggaatgaggagaaagtagtggatggaacctctcacttagtgtggcccagttat
tcctactggaccctgtcctacatagtatcccaacagggggcccagaaactgctcaatcaa
aagcctctcggcaaaatggtgccagtggacgagtaccttcccatcatgtttaatagacat
cctcaaaatgattggaagtccaattttacccctcgtaacttgattacaatgtcagccgag
cctttactagtagaaccaacacattacaccggagaacccaactacatatcagacacagaa
aactcctttgtagtgaaacctgaagaatcgttgcaagagggaaaatcatcaaaagaggag
ttgtga
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