Magallana gigas (Pacific oyster): 105333953
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Entry
105333953 CDS
T03920
Name
(RefSeq) contactin-3
KO
K06761
contactin 3/4/5/6
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
crg04515
]
105333953
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
crg00537
]
105333953
Cell adhesion molecules [BR:
crg04515
]
Immunoglobulin superfamily
Contactins
105333953
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
crg00537
]
Others
105333953
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
fn3
V-set
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
UL45
Lectin_C
Coagulin
Motif
Other DBs
NCBI-GeneID:
105333953
NCBI-ProteinID:
XP_065941326
LinkDB
All DBs
Position
5:46224354..46240359
Genome browser
AA seq
1242 aa
AA seq
DB search
MRQAVLSLLFLIQGVSSQWFNCPENWVLFETHCYQFNVYPYRNYVDAKAACGANGAQLLS
VNTLPEHNFIGQWLLNNDVSAYRWFTSGVVYDMANYDVRWEGDGTKEYLGHSLWVNEDEM
NKPGRQVVYTYGVYAYLLGRDTSSAMNPFICEISQEESYKVVQDERDYTYGFNTTDSEKV
PQGPRFLIQPRSIVVVGKAIAATFECVAYGNPQPDYRITKIANNGSVYDVSSATDYRYTL
TNGKLSIQSPDEIYDAGTYYCTAENQIGTVRSDYLSMRFGSLGEFSNVDRAPVTAYAFQF
AVIDCLPPTYTPAVSYQWYKDDKQFVRPDLHSYIFISRNGKLYFSEVSTADRGNYRCIVK
LTSNNGAAIGTDQPPSRTSLPTLLDVQNAVATVWGPEISNEFISVHPRTPQKGQRVYLEC
LAFGTMPITYSWSRHGLPMSPRASFTDHNRVLIIEDVRIEDGGTYICHASRYTTARTQKN
VTLFIETKPYFSYPLKSQHVDIGSKLTWRCEATAMPEPVYEWYKDGVRLVIIPGKISIVR
NVLTIQNLDISDNGMYQCSAENIYGKSFTEGQLRVLAFPPSFVKEPLIDVMFGVVGGNIT
YPCNPEAAPTPTYTWLKNNMELNLNPGDTTSRIRMLQNGNLLILNINPGDVAYYTCRAEN
QFGRSSSTGQLQIADKVVIGLPPVNVQVKVNQTAFLRCQASYNSLQDVIYTWLFNDEIID
INKNVYYKQGVSQSLTGLFVTAAQFKHSGKYTCRAQTTKEHTEAWAFLTVLDSLHNRLIR
HLLFPGPPSEPAGVYAIQSSIGTSSLLLSWTVGASNGENILFHTVEALPVMLNEWYTAVD
HVSDVSSIVPGLDNKKRVVEVHGLNPGSGYRFRVYSTNSFGVGPRSRQSDAYTTRYGPPT
HPPTHVGGGYGSVGDLTITWMPLEDYQLGGPGIGYYVYYRRNLTDTWTNKVQLTGNVGKY
VTQVGAYNYYLLYDVMIQPYNDLGQGPNSSVSTIYSAEEIPSISITNVQAYPYNATALMV
TWDPVPDTREVMKGKLLGYQVNYWERFTEDPIMNSISWRGQMSSGLVIGLLPDTWYTVNL
QALNMAGMSQISETDFQLTLKMAPRMYPTEIHVGSHGSQSVYVTWRGVTTAIEEEPIQGY
ILRYWFDGDDIRTASDVRVGKQDQAVIYGIQKNYLYCLRVLGFSTGGDGTMSELVYFTLG
GRIAAVDQSLTEVKATASHLTVCHYTILSLCIIQAILRLTYQ
NT seq
3729 nt
NT seq
+upstream
nt +downstream
nt
atgagacaggcggttttatcactattatttctaatccagggagtttcctcacaatggttt
aactgtccggagaattgggtcctatttgaaacacactgttatcagtttaacgtgtaccct
taccgaaactacgtggatgccaaagctgcttgtggtgcaaatggcgcacagttgctgagc
gttaacacacttccagagcacaatttcattggccaatggctgcttaacaacgatgtttca
gcgtatcgctggttcacaagtggagttgtgtacgacatggcgaactatgacgtcagatgg
gagggggacgggaccaaagagtatctgggtcactccttgtgggtcaatgaggacgaaatg
aataaacccgggagacaagttgtgtatacttatggagtgtatgcgtatcttttggggagg
gacacgtcatcagccatgaacccgtttatttgtgagatcagtcaggaggaatcctacaag
gttgtacaagacgagagggattacacgtatggctttaacacaactgattccgaaaaagtt
ccacaaggaccaagattcctgatacagcctcgcagcattgtggtggtcggcaaagctatt
gcagcaacctttgagtgcgtagcttacggtaatcctcaaccggattacagaatcaccaaa
atagccaacaatggcagtgtgtatgatgtcagttccgccaccgattaccggtacactttg
accaatggaaagctctctattcagagcccggatgagatctatgatgccggaacgtactac
tgtaccgcggagaatcagattgggacggtgaggagtgactacctgtccatgagattcggc
agccttggagaatttagcaatgttgaccgagcaccagtgacagcatacgccttccagttt
gccgtcatagactgtcttcccccaacatatacaccagctgtatcctaccagtggtacaaa
gatgacaaacagtttgttcgaccagatcttcattcctacatctttatctcccgcaatggg
aagctgtacttcagcgaggtgtcgaccgcggaccgaggaaactaccggtgtattgtgaaa
ctgacgtctaacaatggtgccgctatagggactgaccagcccccgagtaggactagccta
cccacgttactggacgtacaaaacgcagttgccactgtttggggtccagaaatttctaat
gagtttatctcagtacacccaaggacacctcaaaaaggacaaagggtttatttggaatgt
cttgcctttggaactatgccaataacgtattcttggtctcgccacggccttccaatgtca
ccaagagcgagttttacggaccacaaccgtgtgttgatcattgaggatgtccgaatagaa
gatggcgggacctatatatgtcatgcatcaagatacacaacggccaggacgcagaaaaac
gtcactttgtttatagaaacaaagccttattttagttaccctttgaaaagtcaacatgtg
gacataggaagcaagctaacttggagatgcgaagctacggctatgccggaaccggtatat
gaatggtataaagacggagtccggctggtcatcattccgggaaaaataagcattgtcaga
aatgttttgacgatacagaacctagatatcagtgacaatggaatgtatcaatgttcagca
gaaaacatatatggaaagtcatttacggagggtcaactaagggtgctagctttcccccca
tcgttcgtaaaagagcccctgatagacgtcatgtttggtgtcgttggcgggaatatcaca
tatccgtgtaatccggaagctgcacctacgcccacttacacctggctgaagaacaatatg
gaactaaatttgaaccccggggacaccacctcccgtatcaggatgctgcagaacgggaac
ctgcttattctgaacatcaatcccggagacgtggcgtactatacgtgtagggcagagaac
cagtttggcaggtccagtagtacaggacagctgcaaatagcagataaagtggtaataggt
ctgccaccagtaaacgtccaagtgaaggtgaaccagactgccttcttaagatgccaggct
tcgtacaacagcctccaagacgtcatctacacctggctcttcaatgacgaaatcatcgac
atcaataaaaacgtgtattacaaacagggtgtatcgcagtccctaacagggcttttcgtc
acagctgcccagtttaaacacagtggaaaatacacgtgcagagcacagacaacgaaggaa
cacacagaagcctgggcatttctcactgttctagactcactgcacaatcgtttgatccgc
catcttcttttcccaggtccacccagtgagcccgcgggggtatacgccatccagagcagc
atcgggacgtcctctctccttctgtcgtggactgttggtgcttctaatggagagaacatc
ctctttcacacagtggaagcactgcctgtaatgttaaatgagtggtatactgccgtagac
catgtttccgacgtctcgtcaatcgttccgggtttggacaacaagaaacgggttgttgaa
gttcatggactcaatcccggaagtggataccgcttccgggtttactcaaccaactcgttt
ggagtaggtcctagaagtagacaatccgacgcctatactacacgatatggacctccaacc
cacccacccactcacgtgggaggagggtacgggagtgtgggtgatttaaccattacctgg
atgcctctagaagattatcagctaggaggacctggtattggatattatgtatactaccga
aggaatcttacagatacttggaccaacaaggttcaactgactggaaatgtcggaaaatat
gtgactcaggtaggggcgtacaattactacctgttgtatgacgtcatgatacaaccatac
aatgacttaggccaaggaccaaactctagtgtcagtacgatctactctgcagaagaaatt
ccatctatatcaatcacaaacgtacaagcttacccgtacaacgccactgcactgatggta
acctgggaccccgtgcccgacactcgcgaggttatgaaagggaagctgcttggataccag
gtaaactattgggagagattcaccgaggaccctattatgaactccatcagctggcgcggg
caaatgagtagcggtttagtgattggtctgttgccagacacgtggtacaccgtgaacctg
caagcactgaacatggcaggaatgagtcaaataagcgagacggactttcagctaacctta
aaaatggcgccccgcatgtatccaacagaaatccatgtaggatctcacggctcccaaagc
gtgtatgtcacgtggcgcggggtcactacagctattgaagaagaaccaatccaaggatac
attctacgctactggtttgacggtgacgacattcgaaccgcgtccgatgtgcgtgtgggc
aagcaggaccaggcggtgatctacggcatccagaagaactacctgtactgtctgcgcgtg
ctgggattcagcacgggaggggacgggaccatgagtgaacttgtctacttcacactgggt
ggacggattgcggcagtggaccaatctttgaccgaggtcaaggccacagccagtcatctg
acagtctgccactacaccattctatcattatgcataatacaagcgattttaagattaaca
tatcaatag
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