Magallana gigas (Pacific oyster): 105333955
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Entry
105333955 CDS
T03920
Name
(RefSeq) notchless protein homolog 1
KO
K14855
ribosome assembly protein 4
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
crg03009
]
105333955
Ribosome biogenesis [BR:
crg03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
105333955
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40
Beta-prop_IFT122_1st
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR3_2nd
Beta-prop_EML_2
WD40_Gbeta
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_WDR36-Utp21_2nd
EIF3I
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
DSE1_N
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_Aladin
Beta-prop_SCAP
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_1st
Beta-prop_EML
NBCH_WD40
Beta-prop_TEP1_C
ASA1
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_WDR41
Beta-prop_IFT140_1st
NLE
Beta-prop_EIPR1
Beta-prop_NOL10_N
WD40_RFWD3
Beta-prop_DCAF12
Beta-prop_VPS8
Beta-prop_DCAF4
PAC11
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
CFAP251_N
RMC1_N
eIF2A
Beta-prop_SPT8
Ge1_WD40
Tricorn_2nd
Beta-prop_NUP159_NUP214
PD40
TRM82_WD
PROPPIN
Beta-prop_NWD2_C
Tricorn_N
TAtT
Motif
Other DBs
NCBI-GeneID:
105333955
NCBI-ProteinID:
XP_011435498
LinkDB
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Position
3
Genome browser
AA seq
481 aa
AA seq
DB search
MMEEADSDDKRILAQFKSENGDVTGNAFDLPLNVTAEKLQLICNALLTNEDPIPYSFFVN
DVEVTDTLVKALDSKALDNTEQVLDIVYLPQAIFRVRAVTRCTSTIPGHAEAVISVAFNP
DGRYLASGSGDTTVRFWDVTTETPHHVCKGHKHWVLCIAWSPDGKKLASGCKNSQICVWD
PETGQQKGKTLIGHKQWITWLAWKPFHLDADCRFLASGSKDGTIKIWDTLLSQCHITLSG
HLQCVTCIKWGGTNLIYSSSQDRTIKVWRAEDGVLCRTLQGHGHWVNILALSTDYVMRTG
AFDPANANIVPQDSQESAEELSKIAKERYEKAKGTGAERLVSGSDDFTLYLWQPEEEKKP
VTRMTGHQQLINDVRFSPDTRLVASASFDKSVKLWDGKNGKFLTTFRGHVNRVYQVAWSA
DSRLLCSGSSDSTLKVWDIRQKKLLVDLPGHADEVYAVDWSPDGQRVASGGKDKVLKIWR
K
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgatggaagaagctgattcagatgataagagaattttggctcaatttaagagtgaaaat
ggtgatgttactggaaatgcttttgacttgccattgaatgtcactgcagaaaaactacag
ctgatttgcaatgctttgttgaccaatgaggacccaattccttactccttcttcgtgaat
gatgttgaagtgacagacacattggtgaaggcactggacagtaaagccctagataacaca
gagcaagtgcttgacatagtctacctaccccaggccatctttagggtgagagcggtcact
agatgtaccagcaccatccctgggcatgcagaggctgttatctcagtggcatttaaccca
gatggacgttacctggctagtgggtcaggagatacaacagtgagattctgggatgtaacc
acggaaactcctcatcatgtttgtaaaggtcacaaacactgggtgttatgcatagcttgg
tcacctgatggaaagaaactagcatcaggttgtaaaaacagtcagatttgtgtatgggat
ccagaaacaggtcagcagaaagggaaaactctaattggacataaacagtggattacctgg
ttagcatggaaaccttttcacttagatgcagattgtagattccttgcaagtggttccaag
gatggtacaattaagatttgggacaccttgctaagccagtgccacatcaccttgtctgga
cacttacagtgtgttacatgtattaagtggggcggaacaaacctcatttactcctcctcc
caagacagaaccattaaagtatggagagcagaagatggagttttgtgcagaacactgcaa
ggtcatggccattgggtgaacattctggcactgagcactgactacgtgatgaggactggc
gcctttgatccagctaatgctaatatagttcctcaggactcccaggaatcggctgaagag
ctatccaaaattgcaaaagaaagatatgaaaaagctaagggaactggtgcagagaggctc
gtgtctggttcagatgattttaccttgtatctatggcaaccagaggaggagaagaaacca
gtcaccaggatgacagggcaccagcaactcatcaacgatgtccggttctctccagatacc
aggcttgttgcaagcgcctcatttgataagtctgttaagctttgggatggaaaaaatgga
aagtttttgacgacattcagaggtcatgtaaacagggtgtaccaggtggcctggtccgcc
gacagccgtttgttgtgtagcggaagctccgactccaccctgaaggtgtgggacatcagg
cagaaaaagctgctggtggacctcccagggcacgccgacgaggtttatgcagtagactgg
agcccagatggacagagggtagctagtgggggaaaagacaaggttctgaaaatatggaga
aagtaa
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