Magallana gigas (Pacific oyster): 105334095
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Entry
105334095 CDS
T03920
Name
(RefSeq) WD repeat-containing protein 18 isoform X1
KO
K14829
pre-rRNA-processing protein IPI3
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
crg03009
]
105334095
Ribosome biogenesis [BR:
crg03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
105334095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
EIF3I
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_EML_2
WDR55
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_DCAF4
Beta-prop_IFT122_1st
Beta-prop_SCAP
WD40_MABP1-WDR62_2nd
Beta-prop_VPS8
WD40_RFWD3
Beta-prop_NWD2_C
Beta-prop_WDR19_1st
Beta-prop_Vps41
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
105334095
NCBI-ProteinID:
XP_011435717
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Position
7:8734162..8739629
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AA seq
444 aa
AA seq
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MTSNEILLTSETSGQLWNVCVWDMESGTSVVTFKGGTSAPHGVGVLGQQYLVSASPTKPV
LSLWPLHKRDTTCSKMVCPGNVTALEITEDGAYIVAAIAEKIYVWQVCTGRLLSILSRHY
QTITCLKSSSGLIVSGGEDSLVIVWSLAKALCEQLEHRAPVTPERVWSSHSLPVTDLHLG
VGGHLSRVVSSSLDQTCRLFDVNSGELLCTFVFEVGICSVVLDPAEFRLFAGSSSGTIYA
VNLFETPVRRERHITDKKEDQSCQRFDGHEKQVTCLCVTMDGCQLVSGSHDHKVKIWDIF
SGQCLRTIEHKGPVTNAKLTMAPPGIVNPDVKYKLPLQPLQRVFHADSQEEGGHASLNIL
LHGENDEPEKEEDILKPDSEIQMDFKHRSKDIENMDTNESVTLDIPVPVMTTTVSNSSEL
NKLKNANKELFHFAVSTLLQNKDK
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgacttcaaatgagattttgttgacgagtgaaacatctggacagctctggaatgtctgt
gtgtgggatatggagtcgggaaccagtgttgtgacgtttaaagggggaacaagtgcccct
cacggagtgggggtgttaggtcaacagtacttagtcagtgcttcccccaccaaaccagta
ttatcattatggccgcttcacaagagggataccacatgttccaagatggtttgtcccggc
aatgtaacggcgctggagattaccgaggatggggcctacatagtggcagccattgcagag
aaaatttatgtctggcaggtatgtactggacgactgctgagtatactgagcagacattat
caaaccatcacttgtctgaagagttcatctggtttgattgtatctgggggagaggacagt
ttagttattgtttggtcactcgcaaaagccctttgtgaacaactagaacacagagccccg
gtgacacctgaacgggtgtggtcgagccactccctaccggtcactgaccttcacctgggg
gtggggggacacctgtccagagtggtctcctcctccctggaccagacttgtcgtctcttt
gacgtcaacagtggagagctgttgtgtacgtttgtgttcgaggtcggcatctgctctgtt
gttctggacccggctgagttccgattgtttgccgggagcagttctgggacaatttacgct
gtcaatctatttgaaacaccggtgaggagggagaggcacatcacagacaaaaaagaggac
cagtcctgtcagagatttgatggccatgaaaaacaggtgacctgtctgtgtgtgacaatg
gatgggtgtcagctggtctccgggtcacatgatcacaaggttaaaatctgggacatcttc
agtggacagtgtttgaggacaatagaacacaaagggccagtaaccaatgccaaactgaca
atggcacccccaggtatagtgaatccagacgtaaagtacaagctccctctccagcctcta
cagagggtgttccatgcagactcacaggaagagggtggtcacgcctcactgaacatcctc
cttcatggagagaacgatgaaccagagaaagaagaggatatacttaaacctgactctgaa
atacagatggattttaaacacaggtcaaaagacattgagaacatggatactaatgaatct
gtgaccctggatatccctgtacctgtaatgactaccactgtgtcaaactcatcagaactt
aacaaacttaaaaatgctaataaggagttatttcattttgctgtcagtactcttttacag
aacaaggacaaataa
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