Magallana gigas (Pacific oyster): 105334096
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Entry
105334096 CDS
T03920
Name
(RefSeq) phospholipid-transporting ATPase ABCA1 isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg02010
ABC transporters
crg04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
105334096
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
105334096
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
crg02000
]
105334096
Transporters [BR:
crg02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
105334096
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_15
AAA_23
DUF4162
Motif
Other DBs
NCBI-GeneID:
105334096
NCBI-ProteinID:
XP_065923218
LinkDB
All DBs
Position
7:8740730..8770888
Genome browser
AA seq
2440 aa
AA seq
DB search
MGFFSQLWLLSWKNITLRRRQKFRLVAEIVFPLALFIILVIVRTRPNLKIPVAECHFDGN
AMPSAGAVPFVQSFLCNFNNPCYATVTEDENAGTTGSYSQSTLTKVIQDISKVLKDNSII
TLSQVLQDFEFYSRVLGNMQNGTTSGNVTIGNIVVNPQQIIDVFQDNETRQAVIDLLGTS
ININLLNETLINDILEDVGVCQIPNLNGTGINPTTNLTLAQAQFRDVICDQNQVSQIFNF
TSDAARDLVSIQLCNLTNPESVDNVVLLLGALQRDFNSTSLIDQLQRIALANAGNLGGGN
GPLIDASALPALLKAYQDIQQLSSIGDLVQLIQDLAQDTQSAGGLDLSRAVCGRGNSVFG
MSSAGLAAGLGGILTGGSTGGGNINTGNNTANITFGPERTICDRINATMYSNRATRVIWK
QILPMLQGEILYYPDTPAVRQIIKEANQTFQEFANVINLSRNFSQDYYFELYNYLNNSAN
IEFLRTLTGSCLCDLAFDQLRNSQNIAANYSACKSLNAFLNNGNPTGYDWRNAINSTRML
ALGIAEFGGCFNLNKFVGYKNERQMISDGIKKIDELKFWAALEFQLSDDDLTPLPTHIKY
SIRMDTAKIDKTTKIQDKYWRPGPRANPGTDTKYITYGFAYIQDMVDHAIINVQTQKQVE
IGVETQQFPYPCYTRDRFIYAISRSLPLFLVLAWVLSVAMICKSIVYEKENRLKEVMKIM
GLSNGVHWVAWFINAFVMMFITIVILTIIIKSGKVLEHSDPSVIIFFFTAFAISTIMQCF
LYSTFFNKANLAACVAGFLYFIMYLPYTLAVQWEDFMTTGLKVLSCFSSGVAFGWGCSYL
ARYEEQAIGIQWSNIAESPVVDDDFNMLYCILMMLLDAVIYGIFTWYIEAVFPGQYGIAR
KFYFPFQKSYWCGVSSTKAEGRAYISNKPDIELGNNGIPLLQLNPDANLEAEPKNKKLGV
SIKNLKKVYSEGKKLAVDNLSINFYEGQITSFLGHNGAGKTTTMSILTGLFEPTDGTAYI
YGYDIRSEMDNIRKSLGMCPQHNVLFDGLTVEEHLWFFARLRGLENDQVKKEMEQMIKDV
GLPHKRKELSSSLSGGMKRKLSVAIAFCGNAKTVILDEPTAGVDPYARRSIWELLIKLKK
KRTIILSTHHMDEADVLGDRIAIISHGKLCCCGSSLYLKSQYGSGFYLTLVRGKEGDYGK
DMESDDDLDDDDYPDDTLSIDSRPSTVSSIRTVRAVQASIREPEDEGYDENSKSDSGSDP
PSKPPSPPPEGANMIPGFSIDRLTAFIMRHIKQARLIEDTSTELVFQLPDDESELRKFEN
LFSDLERNHRNLGISSFGISDTSLEEVFLRVAEQNTQDELPDEVKRSRLEDLTDSGRFAR
PVTSLSFKRKKKKSFLKNLVKRGRIEHEELVNDSESVASVPVSEAATESGFSMADYNKVS
GRLLFLRQFQALFIKRFHHLRRSKKGFFFEVIMPALFVLLAMVFAEIKPPEDKQPPLELQ
PWRYVPNKGEQHLYVFYSNDGIGQDWSDKMVQSLLKRPGIGNRCLDPSVYSISEYPCTGE
SSNWMNFRPIQANTTIDSPSCSCDTGFQKCPEGAGGPEPPKKLLPSSDYLYNMTARNVSD
WLVKTMERYQKRRYGGFSFGDEDPLAAFNATELKIVIDELLSVLNNGTALNSFNETQLIE
TIQGLATQRVNKVWYNNKGWFAIVAYMSAMNNLILRSNLDPSLDPTRYGITTVNHPMELT
KTQLNEQLLYQGAIDVVIAICVIFAMSFIPASFTMVLIEERASNSKHLQFVSGVNPFMYW
VTNFLWDMINYLLPCFICIIIFVAFGNDSYVGERNWPCLVLLLFLYGWSMIPVMYPFSRL
FSIPSTSMVVLQSVNVFLGTTATLATYVIEFLQEDDEELKNINKILKQVFLILPQYGLGR
GLMDMAFNQRVSEAAALLGEEIYTSPFEFDQVGRNLLTMFFIGIVFFTLNLLVEYNFFIK
RGMCFWSPKPTYSSLDDEDEDVAAERKRIMSGEGKDDILRLENLTKVYRLFGKKGRNTAV
DRLCVGVPKGQCFGLLGVNGAGKTTTFKMLTGDIFVTKGNAFLNNNSILTDMVKVRRDIG
YCPQFDAFDPLLTGREILKFYARLRGVQEKDIKRVSDWAIRKLGLLIYADKLSGSYSGGN
KRKLSTAISLIGNPQIIFLDEPTTGMDPRARRFLWNCIKNIIKEGRSVILTSHSMEECEA
LCGRLAIMVNGTFRCLGSIQHLKNRFGDGYTIIVRVAGENPDMASVEDFITSTFRGAELL
EAHHNMLQYQLKSRAKLSYIFGQLEKAKSLLNIEDYSVSQTTLDQVFINFAKDQTDLLDD
ELPSQPSKKKSSSFKKSVYPIGGTSGYTDVDNDSIAGSSLGGSTMELLRARKNPRGFPDP
YNSGFLDDESLTGSTVDLIRPGSARSSVRSANSMANVQIF
NT seq
7323 nt
NT seq
+upstream
nt +downstream
nt
atgggcttctttagccaactatggctactctcctggaaaaatataaccctacgacggagg
caaaagttccggttagtggcagagattgtcttccccttggcattattcatcattctagtc
attgtgaggaccaggcccaatctgaagatcccagtcgccgagtgtcatttcgatgggaat
gctatgcctagtgccggtgctgtaccctttgttcagtcgttcctgtgtaacttcaacaat
ccttgctatgctacagtgactgaggatgagaatgcaggcaccacgggcagctatagtcag
tcaacgctgaccaaagtaatccaagacatatccaaggtgctgaaagataactccatcata
actctgagtcaagttctacaagactttgagttttattccagagttttggggaacatgcag
aatgggaccacttctggtaatgtgaccataggaaacatagtggtgaatcctcagcagatc
attgatgtgttccaggacaacgagacgagacaggccgtcattgatctcctgggaaccagc
attaacatcaacctgttaaatgagaccctaattaatgacattttagaagatgtgggagtc
tgtcagatccccaacctgaacggaacaggcatcaacccgacaacgaacctgaccctggcc
caggcccagttccgagacgtcatctgcgaccagaaccaagtctctcagatcttcaacttc
acgtcggacgcggcgcgagatctggtgtccatccaactgtgtaatctcaccaatcccgag
agtgtcgacaatgtggttctgttgctgggggcactacagagggacttcaactccacctcc
ctgatcgatcagttgcagagaattgccctggctaatgcaggaaacctgggaggagggaat
ggaccactgatagatgccagcgccctccctgccttgctgaaggcctaccaagatatccag
cagctgtccagtattggtgacctagttcagctgatccaggacctggcacaggacacccag
tccgccgggggcctcgacctcagtagggccgtctgtgggcgcggtaactcggtctttggg
atgagcagtgcaggtctggccgctggtctggggggtattctgactggaggaagcactggg
ggaggaaacattaacacggggaacaatactgccaacatcacttttggacctgaacgtacg
atatgcgataggatcaatgctaccatgtacagcaaccgtgcaacacgagtgatttggaag
cagatcctgccaatgttgcagggagagattctgtactatccagataccccagctgtcaga
caaatcatcaaagaggccaaccagacattccaggagtttgccaatgtgatcaacctttct
aggaattttagccaggactattactttgagttgtacaactacctcaacaatagcgctaac
attgagtttctccgaactttgaccggttcctgcctttgtgacttggcttttgaccagctg
aggaacagccagaatatcgcggctaactacagcgcctgcaagtctctgaatgccttccta
aacaatggtaatcctaccggctatgactggaggaacgccatcaacagtaccaggatgctg
gctctcggtatcgcagagtttggagggtgcttcaacttgaacaagtttgtgggctacaag
aatgaaagacaaatgatcagtgatggcataaaaaagattgatgaactgaagttttgggca
gctctggagttccaactgtctgatgatgaccttactcctctccccacccacatcaaatac
tccatcagaatggacaccgccaaaatagacaagaccaccaaaattcaggacaaatattgg
cgcccaggacccagagcaaacccaggcactgacaccaagtacatcacgtacggctttgct
tacatccaggacatggtggaccatgccatcatcaatgtccagacccagaaacaggtggag
attggggtggagacccagcagttcccctacccctgctacaccagggacagatttatttac
gctatatcgcgctccctgcccctgtttctggtgctggcctgggtgctctctgttgccatg
atctgtaagagtattgtctacgagaaggagaatcgtctgaaggaggtgatgaagataatg
gggctgagtaatggagtccactgggtcgcctggttcatcaacgccttcgtcatgatgttc
atcaccatcgtcatcctcaccatcatcatcaagtctggcaaagttctggagcactccgac
ccgagtgtgatcattttcttcttcactgccttcgcgatctctaccatcatgcagtgcttc
ctatacagtacgttcttcaacaaggccaatctggcggcgtgtgtggcgggcttcctgtac
ttcatcatgtacctaccctacacactggccgtacaatgggaggacttcatgaccacagga
ctcaaagttctatcttgtttttcctcgggggtggcctttgggtggggctgtagttacctg
gccaggtatgaggagcaggctatcggcattcagtggtccaatattgcggagagcccggtt
gtagacgatgattttaacatgctgtactgtatcctgatgatgctgctggatgctgtcatc
tatggaatcttcacctggtacattgaggctgtgttcccaggtcaatatggtatagccaga
aagttttactttcctttccaaaagtcctactggtgcggtgtgtccagtaccaaggctgag
ggcagggcttacatcagtaacaagcccgatatagaactcggaaacaatggaatcccactg
ttgcaattaaatccagatgcaaacttagaggctgagcccaagaacaagaagctgggcgtg
tctatcaagaacctgaagaaggtgtacagtgagggcaagaagctggccgtcgacaacctg
agcatcaacttctacgagggacagatcacctccttcctcggccacaacggggccggcaag
accaccaccatgtcaattttaacaggcctgttcgagccgacggatggaactgcctacata
tatggctatgatatccgttctgagatggacaacatcaggaaaagtcttgggatgtgtccc
cagcataatgtgttgtttgatgggctgactgtggaggaacatctgtggttctttgcccgc
ctgagaggacttgagaatgaccaggtcaagaaagagatggagcagatgataaaggacgtg
gggctgccccacaaacggaaggagctctcctcctccctgtcagggggtatgaaaaggaag
ctctctgtggccattgctttctgtgggaatgcgaagacggttattctggatgagccaaca
gctggagtggatccatacgctcgtcgttctatctgggagctactcatcaagctgaaaaaa
aaacgaaccatcattttgtctacacatcacatggacgaagctgatgtgttaggagataga
atagccataatatctcacggaaaactgtgttgttgtggctcaagtctctatctgaagtcc
cagtatggcagtggcttctatctgactctagtacggggaaaagaaggggattatgggaag
gatatggagtccgatgatgacttggatgatgatgattatccagatgatactttgtccata
gattcacgaccaagcactgtgtccagtatccgtactgttcgcgctgttcaggcatcaatc
agagaaccagaagatgaaggctatgatgagaactccaagagtgactcggggagtgatccc
ccctccaagccgccatcgccaccaccagagggagctaacatgattccaggtttctccatt
gatcgactgactgcgttcatcatgagacacattaagcaggctcgactcatcgaggacaca
agcactgaactcgtgttccagctgcctgatgacgagtcagaactcagaaagtttgagaat
ctgttcagtgaccttgaaaggaaccacaggaaccttggaatctccagctttgggatttct
gacactagtctggaagaggtgtttctgagagttgctgaacagaacacacaggatgagtta
cctgacgaagtaaagcgaagcagactagaagacctgactgacagtggccgattcgcccgt
cctgtgaccagtctaagcttcaaaaggaaaaagaagaagtccttcctgaagaacctggtg
aagcgcggacgaattgaacacgaggagcttgttaatgattcagagtctgtggcctccgtt
ccggtcagtgaagccgccacagagtcgggcttcagcatggcggactacaacaaggtcagc
ggccgcctcctgttcctcagacagttccaggccctgttcatcaaacgattccaccatctc
aggcgctccaagaaaggattcttctttgaggtcatcatgccagctttgtttgtgttgctg
gccatggtatttgcagagattaaacccccagaggacaaacagcccccgctagagcttcag
ccctggagatacgtcccaaacaaaggcgaacaacacctttatgtcttctacagcaatgat
ggaattggacaggactggtctgataagatggtacagagtctgctgaagaggccgggtatt
gggaaccgttgtttggaccccagtgtctactccatcagtgagtacccctgcactggggag
agttctaactggatgaacttccgtcccatccaagctaacaccaccatcgattcgcccagc
tgttcctgtgacactggattccaaaaatgtccggaaggtgctgggggccctgaacctcca
aagaagctgttgcccagctccgactacctgtacaacatgacagctagaaacgtcagtgat
tggttggtcaaaaccatggagaggtaccagaaaaggagatatggtggattttcctttgga
gatgaggacccactagcagcatttaatgccaccgagttaaagatagtgatagatgaactg
ttatctgtgttaaacaatggaacagctttgaactcattcaatgaaactcagctgattgag
actattcagggattggccactcaaagagttaataaggtctggtacaacaacaagggctgg
tttgcgatcgtggcctacatgagtgccatgaataacctgatcctgcgcagtaaccttgac
ccttccctggaccccactcgctatggaatcaccaccgtcaatcaccctatggaactgacc
aaaacacagctgaatgagcaattactataccaaggtgctattgatgtggtgatcgcgatc
tgtgtcatatttgccatgtccttcatccctgccagcttcaccatggtcctgatcgaagag
agggcctccaactccaagcacctgcagtttgttagtggagtcaaccccttcatgtactgg
gtgaccaacttcctctgggacatgataaactacctgctgccgtgcttcatctgtatcatc
atttttgtggcatttggcaacgattcttatgttggtgagagaaactggccctgtctggtg
ttgctgctcttcttgtatgggtggtccatgatcccggtgatgtacccattctcccgcctg
ttcagtattcccagcacctccatggtggtgcttcagtcggtaaacgtcttcctgggtacc
acggcaacactggccacttacgtcattgagttcttgcaggaggatgatgaggagttgaag
aacatcaacaagatcctaaagcaagtgttcctgatcctgccgcagtacggcctggggcga
gggctgatggacatggccttcaaccagagagtgtctgaagctgctgctctactgggtgaa
gaaatttacacaagccccttcgagtttgaccaagttgggaggaacctgttgaccatgttt
tttattggcatcgtctttttcacactgaatttgctagtagaatacaacttcttcattaaa
agagggatgtgtttctggtcccccaagccgacctacagttccctggatgatgaggatgag
gatgtagctgcagagaggaagaggatcatgtcaggggaaggcaaagacgacatcctgagg
ctggagaacctcacaaaggtttatcggttgtttggaaagaagggtcgtaacactgctgta
gacagactttgtgttggggtgcccaagggccagtgctttggtttgctgggagttaacggg
gcaggaaagaccacaacattcaaaatgctgacaggggacatctttgtaactaagggcaat
gccttccttaacaataacagcatcttgacagatatggtaaaggtacgacgagatatcgga
tactgtccgcagttcgatgcttttgaccctctgttgactgggagagagatcctgaaattc
tacgctcgactgagaggggtgcaggaaaaggacatcaagagagtgtctgactgggccatt
cggaaactaggactgcttatatatgcagacaaactgtcgggaagttactccggagggaac
aagaggaagttgtccactgctatctccttgattggaaatcctcagattatattcctggat
gagccaactacaggaatggaccccagagctcgccgattcttgtggaactgtattaagaac
atcatcaaggagggtcggtctgttatcctcacctctcacagcatggaggaatgtgaggct
ctgtgtgggcggctggccatcatggtcaatggaacattccgctgtctgggcagcatccag
catctcaaaaatagatttggtgatggctacaccattatagtccgagtagcaggcgagaac
ccagacatggccagtgtagaagatttcatcacctccacattccgtggagcagaattactg
gaggctcaccacaacatgttacagtaccagcttaagtcacgagccaaactgtcctacata
tttggacagttagagaaagccaagtccctcctcaacatcgaggattactcagtctcccag
actacactggaccaggtgtttatcaactttgccaaggaccaaacagatttgttggatgat
gagcttccatctcagccttcaaaaaagaaatccagtagtttcaaaaaaagtgtgtaccct
atcggtgggacctcgggttacactgacgtagacaatgacagcattgctggctcaagtctc
ggagggtccaccatggaacttctacgagcacgcaaaaatccaaggggattccctgatcca
tacaactcgggcttcctggacgacgagagcctcaccggaagtaccgtcgacctgattcgg
cccggtagcgcgaggagcagtgtccgcagtgctaactctatggccaatgtacagatcttc
tag
DBGET
integrated database retrieval system
