Magallana gigas (Pacific oyster): 105334101
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Entry
105334101 CDS
T03920
Name
(RefSeq) probable lysosomal cobalamin transporter
KO
K14617
LMBR1 domain-containing protein 1
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg04977
Vitamin digestion and absorption
crg04980
Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
105334101
04980 Cobalamin transport and metabolism
105334101
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crg04131
]
105334101
Membrane trafficking [BR:
crg04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
105334101
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LMBR1
DUF3810
Bap31
Motif
Other DBs
NCBI-GeneID:
105334101
NCBI-ProteinID:
XP_011435728
UniProt:
K1P9W7
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Position
7:8797380..8805206
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AA seq
537 aa
AA seq
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MSIPSAALAAGWIPFVVTLVLILLFSGAYVKYFISKRDGTLSTTLSSVVALSVTLLTTAL
IPVDVFLVSFMKKTDGTFKDWAVSNATRQSMETSVSDAYYSLYGLIVFCLFLLLPFMYFF
YEERDEESTVKSRICSALKFTIVSLFIIVTLLLVGAFVGVNHGSSTPSGNNTNQWKRIAD
LFKEFGNDTRLEDALSFVMSVLSLLGMLALIMYSAYGMSAMPMSLIKGTKSAKAERSDVQ
NRRSRISERSRAIREKYTRRGLSSRNRGQVESMDEEERLLQREERHLEVKERSVLQKCLL
VLRPFEVVFGVLFFLVTLLVFVSLLLTNIDKAIHSLGYKSGYALPQRNLPNPVDIVLVFC
QKVFPLDYIMFAALVLYLVFCSMSGVRNIGIWFLWLRMYKIRPRRTRPQGILMMCMIMMF
LTLAINIIIYELTPQYSSFGSQRYVISKGNSSHVEIVSCTAEATADDCTVTRMTLLLTSF
FYRMWFFGAAYYWGTWVFLGFILIGFIISVIKKRRSAIDGEVDADDFDDSDEELLPG
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatcccaagtgcagcactcgcggcagggtggatcccttttgttgttaccttggtt
ctgatcttgttattttcgggtgcgtacgtgaagtactttatcagtaaaagggatggcaca
ttatctacgacactgtcatcagtggtcgccctcagtgtgacgctgctgaccacagctctc
atccccgttgacgtcttcctggtctcatttatgaaaaaaacagatggcactttcaaggac
tgggctgtgagtaatgcaactaggcagtcaatggagacctccgtgtcagatgcttattat
tcgctgtatggtctgatagttttctgcctctttctcttgttaccattcatgtactttttc
tatgaagaaagagatgaagaatctactgtaaaatctagaatttgttccgccctaaagttt
accattgtgtctttgttcatcattgtaactctcctgttagttggtgcctttgttggggta
aatcatggaagttcaacacccagtggaaataataccaaccagtggaagaggattgcagac
ctctttaaagagtttggaaatgataccagattggaggacgccctgtcttttgttatgagt
gtactaagtcttctgggaatgttggccctcatcatgtactcggcctatggaatgtcagcc
atgccaatgtcattgatcaagggaacaaaaagtgctaaagcagaacgaagtgatgtccaa
aaccgaagatcaaggataagcgaaaggtcaagggcaatccgggagaagtacaccagacgc
ggcctgtcgtctcggaaccgtggccaggtggagagcatggacgaggaagagaggctgtta
cagcgcgaggagagacacctggaggtcaaagagaggagcgtcctacagaaatgtctgctg
gtcctgcggccgttcgaggtcgtgttcggagtgctgttctttcttgttactctgctggtg
tttgtgtcactgttactcacaaacattgacaaagccatacatagcttgggctacaaatct
gggtatgccttaccccagagaaacctccccaaccctgtggatatagttctagtcttctgt
cagaaggtgtttcctctggactacatcatgtttgctgccttggtcctgtacctggttttc
tgctctatgtccggtgtcaggaacatcggcatctggttcctctggctcaggatgtacaag
atccgcccacgaaggacacgcccccagggcatcctgatgatgtgcatgatcatgatgttt
ttgacgctagccatcaacatcatcatctatgagctgacccctcaatactcctcgtttggc
agtcagagatatgtgataagtaaagggaattcctctcatgttgaaattgtatcatgtact
gccgaagcaacagcagatgactgcaccgtcaccagaatgaccctgctgttgaccagtttc
ttctacaggatgtggttctttggagcagcatattactgggggacttgggtgttcctgggg
tttatcctgattgggttcatcatttctgtgatcaagaagaggagatctgccattgatggt
gaggtggatgctgatgattttgatgacagtgacgaggaattgttaccaggataa
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