Magallana gigas (Pacific oyster): 105334109
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Entry
105334109 CDS
T03920
Name
(RefSeq) general transcription factor 3C polypeptide 3
KO
K15201
general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
crg03021
]
105334109
Transcription machinery [BR:
crg03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
105334109
TFIIIC, fungi type
105334109
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_8
TPR_1
TPR_2
TPR_14
TPR_12
TPR_16
TPR_9
TPR_19
TPR_7
TPR_CcmH_CycH
TPR_6
ANAPC3
HAT_PRP39_C
TPR_15
ARM_TT21
TPR_20
TPR_EMC2
TPR_21
Motif
Other DBs
NCBI-GeneID:
105334109
NCBI-ProteinID:
XP_034311877
LinkDB
All DBs
Position
7:8814008..8823486
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AA seq
724 aa
AA seq
DB search
MGEANIKFAQGDHEKAISICMDIIKMAPEAYMPFQTLGLIYEDQGDLKKSLQYSLISAYL
NPVDRNSWIRLAELCQELGDKQQATLCYTKALRAEPQNPQNLDLFWSRSHLYEELGEKKK
ALEGYKSMLRITPSQDGERYMEIARTITKHYYEEDDKVSAMETMRNAFEANSENVTAEDV
NLFMELLMTQRQFLQAIEVLVNHCGVVFQLNVNREWSKAVPIGISLIENGAVKISSVAIP
EILPIDLRVKLGICLIQNKLFTIAQVVINQLFQESVEDVGDLYLDVAEAYMDQRCFVDAK
PILKKLVNSENYNLAAVWLRLAECLNSLGEVERAVDAYSRVVEMAPSHIEARMSLSTLQS
QLGKHEEALKALSRDESDGLLTKEEKTLLLQRCMLFYAHGRLDEFYHECKALLFNMFKDL
NDPDFIKAVYCCRSNKTRREMLQDHFKPGYKVGDSSKSDIPVDDLWDLFVKLCELLLNNK
KYDDLLEVTALSMSCPYFMLEPRKVKQAEFMCLLACIRSKNEHFAFSHIREICIKEGHKN
QAWNLLNQVLLISTENRHSRFCLRYLLTNPDHAPVELLNGHNATISGTYKYALGEYVAVL
RTCPEDPLVNLCIGLTLIHLAGQKYSSKKHSLFAQGLTFINNYMELRGECQEIYYNLGRA
LHQLGLTYAAIHYYKKGLTFPPIIEDGENRFDLTHQLAYNLMIIYKSSGSDALARHIMNR
YLVI
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgggagaagctaatatcaagtttgctcaaggagatcatgaaaaggccatatcaatatgc
atggatatcatcaagatggctccagaagcatacatgccctttcagacactgggccttatt
tatgaggaccagggggacctcaagaaatcccttcagtacagtttgatatcagcgtaccta
aacccagtggaccgtaacagctggatccgactcgctgaactatgtcaggagctgggagac
aaacaacaggccactctctgttacaccaaagcactacgagctgagcctcaaaatcctcaa
aaccttgacttattctggagcagaagtcatttatatgaagagttaggggagaagaaaaag
gccctagaaggctataagtccatgctgaggataactccatctcaagatggcgagcgatac
atggagattgctagaacaatcaccaagcattactatgaagaagatgataaagtgtctgcc
atggaaaccatgagaaatgcatttgaggcaaattctgaaaatgtgacagctgaagatgtg
aatttattcatggaactgttaatgactcaaagacagtttctgcaagccattgaggtgctg
gtgaatcactgtggggttgtatttcaattaaatgtcaacagagaatggagcaaagctgta
cccataggcatctccctcatagaaaatggtgccgtcaaaatcagctctgttgccatacca
gaaatccttcccattgacttgagggtgaaacttggaatatgcctgatacagaacaaactc
tttactattgcacaggttgtcataaatcaactgtttcaagagagtgtggaagatgttggt
gatttatatttggatgtagcggaggcatacatggaccagagatgttttgttgacgcaaag
ccaatcctgaagaaacttgtcaactcagagaattacaacttggctgctgtgtggctgagg
cttgcggagtgtctgaactccctgggggaggtggagagagcagtggatgcctacagcagg
gtagtggagatggccccctctcacatcgaggccaggatgtccctgtccaccctgcagtca
cagctggggaaacacgaggaggcattgaaagcactcagcagggatgagtctgatggttta
ctcacaaaagaggagaaaactttgctgctccagagatgtatgctgttttatgcccatggt
cgattggacgagttttaccacgaatgtaaagccttgttgttcaacatgttcaaggatcta
aatgacccagacttcatcaaggctgtatattgctgtagatctaataaaactaggagagaa
atgctgcaggaccattttaaacctggctataaagttggagattcatcaaagtctgacatt
ccagttgatgacttatgggatttgtttgttaagctgtgtgaattgttgttaaacaacaag
aaatatgacgatttactagaagtgacggcccttagtatgtcctgtccctacttcatgcta
gagccaaggaaagtcaagcaagctgagtttatgtgtctgctggcctgtattcgatcaaag
aatgaacactttgccttcagtcatatcagagaaatctgtatcaaggaagggcacaaaaac
caagcatggaatttactgaaccaagtattattgatttccactgaaaacagacatagcaga
ttttgtcttcgctatctactaactaatcctgatcatgctcctgtagagttacttaatggg
cataatgcaaccatatccggaacctacaagtatgcactaggagagtatgtggcagttctc
cggacgtgtcctgaggacccattggtcaatctctgtataggactcacattaatccacctg
gctggccagaagtattcctctaaaaagcattccctctttgctcagggactaacctttata
aacaactacatggaacttcgaggggagtgtcaagagatatactacaacttgggtcgagca
ctgcatcagctggggctgacctatgctgccatccattactacaaaaaaggcctgacattt
cctccaatcatcgaggatggagagaatcggtttgacctgacgcaccagttggcttacaat
ctgatgattatctacaagtccagcggctccgatgccctagccagacatatcatgaatcga
tacttggtcatctga
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