Magallana gigas (Pacific oyster): 105334252
Help
Entry
105334252 CDS
T03920
Name
(RefSeq) H/ACA ribonucleoprotein complex subunit DKC1
KO
K11131
H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-]
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
105334252
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
crg03009
]
105334252
03032 DNA replication proteins [BR:
crg03032
]
105334252
Ribosome biogenesis [BR:
crg03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
105334252
Prokaryotic type
105334252
DNA replication proteins [BR:
crg03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
Dyskerin complex
105334252
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DKCLD
TruB_C_2
TruB_N
PUA
Pus10_C
UPF0113
Motif
Other DBs
NCBI-GeneID:
105334252
NCBI-ProteinID:
XP_011435929
UniProt:
K1R9B6
LinkDB
All DBs
Position
8:18856661..18863199
Genome browser
AA seq
498 aa
AA seq
DB search
MAANEQKKKKRKSESMDIAEVQHSENFLLKPSSVVEQLDTSQWPLLLKNFDKLNVRTAHY
TPIPAGYSPLKRPIQEYLKSGFINLDKPANPSSHEVVSWVKRILRVQKTGHSGTLDPKVT
GCLIVCIERATRLVKSQQGAGKEYVCIFKLHSAVEDEKLVAQKIEMMTGALFQRPPLISA
VKRQLRIRTIYECKMWEYNKEDAMGIFWVSCEAGTYIRTMCVHLGLFLGVGGQMQELRRV
RSGIMSEKSQLYTMHDVMDAQWTYDHHKDESYLRRVVNPLEALLTSHKRIIMKDTAVNAV
CYGAKIMLPGVLRYEDGIEVNDEIVIVTTKGEAVALAIAQMTTAVMATCDHGIVAKIKRV
VMERDTYPRKWGLGPVAMKKKKMIQEGTLDKYGKPNEKTPSNWKKGYEDFNIKKEPTEDT
PVKENSHKRKKEASSSDESEPPSPKPVENDETEKKKKKKKKKDKDQEADEAGDAPEESPE
KKKKKKKKHKKIKTEDSD
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgaatgaacagaagaaaaagaagaggaagagtgaatccatggatattgctgaa
gtccagcactccgaaaattttcttctgaagccttcaagtgttgtcgaacagctggataca
tcccaatggcccctattgctaaagaattttgacaaactgaatgtcagaactgcacactac
acacccattcctgctggatactccccactgaaaagaccaattcaagaatatctcaagagt
ggttttatcaatcttgacaaaccagcaaacccttcatcacatgaggttgtatcatgggtg
aagagaattttgcgtgtacagaaaactgggcacagtggaacacttgatcctaaagtaaca
ggttgtctgattgtctgcatagaacgagccacacgattggtcaaatcacaacaaggggcg
ggcaaggagtatgtttgtatcttcaaacttcatagtgctgtagaagatgaaaaactggtc
gcacagaaaatcgagatgatgactggggcactgtttcagagacctcccttaatttcagct
gtgaaaagacagttaagaattcgaacaatctatgagtgcaagatgtgggagtacaataaa
gaggatgcaatgggtattttctgggtgagctgcgaggctggcacatacattaggaccatg
tgtgtacatctgggcctcttcctgggggtcgggggtcagatgcaggaactcaggcgcgtc
agatctggcatcatgtctgaaaagtctcagttgtacaccatgcacgacgtaatggatgca
caatggacgtacgaccatcacaaggatgaatcttatctacggcgagtcgtcaacccactg
gaagctctgttaacctctcataaaagaatcatcatgaaagataccgctgttaacgctgtg
tgttatggagctaaaattatgttgcccggtgtcttaagatacgaagatggaattgaagtg
aatgatgaaatagtgattgtaacaacaaaaggagaggctgttgctcttgccatagctcag
atgaccacagcagtgatggccacttgtgatcatggaattgtagccaaaatcaaaagggtt
gtaatggagagagacacatatccaaggaagtgggggctgggccctgtggcaatgaagaaa
aagaaaatgatccaggagggaacactagataaatatggcaagccaaacgaaaagacaccg
tctaactggaagaaaggctatgaggactttaacattaaaaaggaacctacagaggatacc
ccagtaaaggagaactctcacaagagaaagaaggaagctagtagttctgatgagagtgag
ccaccatctcccaaacctgtagaaaatgatgagacggagaaaaagaagaagaaaaagaag
aagaaagacaaggaccaggaagcggacgaggctggagatgctcctgaggagtctccggaa
aagaagaagaaaaagaaaaagaagcacaagaaaataaagacagaagatagtgattga
DBGET
integrated database retrieval system
