Magallana gigas (Pacific oyster): 105334794
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Entry
105334794 CDS
T03920
Name
(RefSeq) cholesterol transporter ABCA5
KO
K05648
ATP-binding cassette, subfamily A (ABC1), member 5
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
105334794
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
crg02000
]
105334794
Transporters [BR:
crg02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
105334794
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
RsgA_GTPase
SMC_N
ABC2_membrane
AAA_22
AAA_29
TsaE
AAA_16
AAA_23
AAA_30
Rad17
Zeta_toxin
AAA_15
AAA_19
AAA
Motif
Other DBs
NCBI-GeneID:
105334794
NCBI-ProteinID:
XP_011436671
LinkDB
All DBs
Position
7:16702222..16730355
Genome browser
AA seq
1751 aa
AA seq
DB search
MSVQKSVFQDPERQYLLDKEEDQEEKMATFIQQFKALMYKHILYKKRNKGQLIQEIVYPI
YFVGILAMIKAFLPLDPLPAIPSFPLVRPENFTLENTDKILVCPNDSLTQAIAGDAAGIF
KQIMGLNATPSLEFYPDDVKMVAAFQEKYSQIKGFTGLQFNYNGANLSYAIRMRISDIGD
TKTLAYYRTTNEQCRQGTGLDSSSCDVLKYMHTGFSMMQMAADTALMRHHTGVTAIQPLD
LSFQLMPMDKYQPDTSYIQIISSLYFVLAYAQFVNFLTANIVNDKEKKIKEGMKMMGLRD
SAYWASWAAVYFVLITVVTIVVTLIAYLAQFYKNSNMFLFFLILELYGLSLISFSWLITP
FFQKAQTAGGLASLISMVTSLLYLAVSMTRTVTSTGEVTYTIPPVGRAFLSLISPCGVAL
AIDQSLFLDITVGMDFETIKSGDFPLYGYLLMLVLDAVLYYMLAIYLDNIVPGNYGPRFP
PYYIFMKSYWFQSKSSKYNSKADDTDLFFGNDVEHVTQETREKQGIRIYNITKEFPSKEK
EKEKVKAVEDLSLEMYEGQITCLLGHNGAGKTTLLNMLSGLVPPSTGTAIVQGYDVSNPS
DVVRMRAITGVCPQHDILFDVLTCVEHLTFYAGLKGITGDELKKRINQTIKDVGLEDQKD
TFAKDLSGGQKRKLSVAISLIGDPKIIYLDEPTAGMDPYSRRHLWNVLKEKKKNRLILLT
THFMDEADILADRKAFISKGKLRCCGSSLFLKSRFGIGYHLNMVVEPNCKESNVTDFVRG
HVEGAEFTRVHGKELSYTLPLNQVSQFSALFSDMESTSGMSSKAESLGIKSYGVSMTSLE
EVFMKLEEDDVSKKLNERTEPAIEDENGHFPHNRVSPLTVGDTCHTQVTIGTDLLDLEKQ
TENLSKRQFKAMVKMWILLNFRNKANLVFSLVLPVIFVIIGLVVNKTSSNVTYDSKPTPI
SLQGLPSYARSKLFPSAVPGLLLNNSDGSPTSSEWTSLINSFYYTDGFSDSSNLLSIAPH
YAGMKVSQLQESGTPPKFDGAFTIFYNASATYSIPMLINALTNSILSLQANKTGSTAQVI
STTNLPWTADSGQNRFNNGAFSSIILIGMAFIAVAPTFAIYMVKDRETKVRTQLRVAGVS
FWMYWGTHLVVDIVKFSFPGILCVIVVLIIQLDSLSSAGAVGSLILLVLFYIPVAVLFSY
FASYMFQKSVTAQQFILTIFIFLGLLPYTAVSMLDMFALEKIARALHIVFSIIDPPYIIF
GGLYYIDKVYRVKTFYMLSTVDDADYFKMENNLVYTYLICLFDLVIISMLLRMLDIKHTG
GDVKDAFPCHQQEITVPHTNTDIIDNEDDDVKAERERVKDIFNKNNISKPVAIAENLRKE
FQKNKSQRKCCKKGQKDEIKTAVRNASFAVDDGEVFGLLGPNGAGKTTVINMIVAEIGPT
RGRVVVGGHDIQSSMSEAFQVMGYCPQHDALEELMTLKEHLVLYATIRGVQEDKVNDLAE
WFIEQLKVQEHANKRSKKLSGGTKRKLSYAISMLGKPRIVLLDEPSTGMDPASKRFLWDT
ITNSFQNKDRGAILTTHYMEEADALCSRVGIMVNGKLECLGPTQHLKNKFGSGYILEVKL
KAGIAHETQDSVEQRMNKLEEYVFSMFPDAVIVERFGLRAQYKIPRNNVKSLAHVFSSLE
EGKRTHDMEEYNFSQSSLEQVFLEFAKRQLDENVTDENVDNEQNSLEQSLRLRTSSREQG
RNSSQGSGNVV
NT seq
5256 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtgcaaaaatctgttttccaagatccagagagacaatatcttctggataaggaa
gaagaccaggaagagaaaatggccacatttatccagcagtttaaggcccttatgtataaa
catatactgtacaagaaaagaaacaaaggccaacttattcaggagatagtctaccctatc
tattttgtcgggatattggctatgataaaagcctttcttccattggaccccctgccagcc
attcccagcttcccattggtcagaccagaaaacttcacactcgagaacaccgacaagatc
ctggtgtgtccaaatgacagtctcactcaagccatcgctggagatgcagcgggaatattc
aaacaaattatgggtcttaatgctacaccttctttagaattctatcccgatgatgttaaa
atggtggcagcttttcaggaaaaatattcccaaattaaagggttcacaggattgcagttc
aattataatggagcgaacctgtcctatgcaatcaggatgagaatttcagatattggagat
acaaaaacccttgcctattacagaactactaatgagcaatgccggcaaggcacgggcttg
gattcaagttcctgtgatgtcctaaagtacatgcacaccggattcagcatgatgcagatg
gctgcagacacggcgctaatgaggcaccacacaggtgtaacagcaatacagccgctggac
ctgtccttccagctaatgccgatggacaaataccagccggacacgtcctacatacagatc
atctcctccctctactttgtcctggcctatgcccaatttgtcaatttcctcaccgcaaac
atcgtcaatgataaggagaaaaaaatcaaggagggaatgaagatgatgggcttgagagat
tccgcctactgggcgtcatgggcggccgtatattttgttctaatcactgtggtaaccatt
gttgtgactctgattgcatacttggcgcagttttacaagaacagcaacatgttcctcttc
ttcctgattctggagctgtatggtttgtctctcatcagcttttcatggcttatcactcca
ttctttcaaaaagcccagacagcagggggattggccagtttgatctctatggtcacgtca
ctgttatacttggctgtcagtatgacccggaccgtgaccagcacaggggaagtaacctat
accatacctcctgtggggagagcgttcctaagtctgatatctccctgtggtgtagcttta
gctattgaccagagcttatttctggatatcacagtaggaatggacttcgagaccatcaag
tcaggagatttccctctctatggttatctgctgatgttggtgctagatgctgttctctat
tacatgttggctatctacctggataatattgtcccagggaattatggccccagatttcct
ccatattacatcttcatgaaatcttactggtttcaatcaaaatccagcaagtataatagc
aaagcagacgacacagatttgttctttggaaatgatgtggagcatgttacccaggaaact
agggagaagcaaggaattagaatttataacataacaaaggaattcccttccaaggagaag
gagaaagaaaaagttaaagctgttgaagatttgtccctggaaatgtatgagggacagata
acatgtcttttgggacacaatggagctgggaaaactactctgctcaacatgttaagtgga
ctggtgcccccttcaactggtactgcaattgtacaaggatatgacgtatcaaacccgtca
gacgtagtgaggatgagggccattactggagtctgcccacagcacgacatcctctttgat
gtcttgacctgtgtggaacatctgaccttctatgctggactgaagggcattactggagat
gagttgaagaagaggattaatcaaaccatcaaggatgttgggcttgaagaccagaaggac
acatttgccaaggacctgagtggtggtcagaagaggaagctttctgtggctatatcgctg
ataggagacccaaagattatttacctggatgagcctacagcaggaatggatccatattcc
agacgacatctgtggaatgtcctgaaggagaagaaaaagaataggttgattcttctgaca
actcattttatggatgaagcagacatattggcagacaggaaagcatttatcagtaaggga
aagcttcggtgttgtggttcatccctgtttctgaagagcagatttggaataggatatcat
ttgaacatggttgtggagcctaattgcaaggagagtaatgtcacagactttgtcagaggg
catgtagagggagcagagttcacacgagtgcacggcaaagaactctcctacaccctcccc
ctgaaccaagtcagtcagttctcagccctattcagtgatatggagagtacatcaggaatg
tccagtaaagctgaatcccttgggatcaagtcctatggggtttccatgacatccctagag
gaagtattcatgaagctagaggaggatgatgtatccaagaaacttaatgaacggacagag
ccggccattgaggacgagaacggacatttcccccacaatagagtcagcccactcacggtc
ggcgacacctgccacactcaagtcaccataggcacggatttactagaccttgaaaagcag
accgaaaatctctccaaacgccagttcaaggccatggtgaaaatgtggatccttctgaat
ttccgcaacaaggccaatctagtattctcgctggtgttaccagtgattttcgttatcatt
ggattggttgtgaacaagacttcttcgaatgtaacgtacgatagtaagccgacgcccatc
agtctccagggcctaccatcctatgccaggtccaagctttttccatcagccgtcccaggt
ttattactgaataattcagatggttcaccaacaagttcggagtggaccagtctcatcaac
agcttctattacactgacggtttctcggactcctccaatctattaagcattgcaccacat
tatgctggcatgaaggtttctcagctacaagagtctggaacccctcccaagtttgacgga
gcttttaccatcttctacaatgcctcggcaacttacagcatcccgatgctcatcaatgcc
ctcaccaactccattctaagtttgcaagccaacaagactggttctacagcccaggtcatt
tctacaaccaacttgccgtggaccgcagattccggccaaaaccggttcaacaatggcgcc
ttttcctccatcatcctgatcggaatggcattcattgctgttgctccaacttttgctatt
tacatggtcaaagatagggagacaaaggtgcggacccagctgcgtgtggcgggggtgagc
ttctggatgtactgggggacccacctggtggtggacattgtcaagttcagcttcccagga
atcctctgtgtaatcgttgtacttatcatacagctggatagtttaagcagtgccggggct
gtaggttctctgatactgctggtcctgttttacatcccagtggctgtcctgttctcctat
ttcgcttcctacatgttccagaaatctgttacggcccagcagttcatcctgacaatattt
atctttcttggtttattgccgtatactgcagtgtctatgttggacatgtttgctcttgaa
aaaattgcccgagcgcttcacattgtcttctccatcattgatccaccctacatcattttt
ggaggattgtactatattgataaagtataccgagtcaaaaccttttatatgcttagtact
gttgatgatgcagattatttcaaaatggaaaataatctcgtgtacacctacctcatctgt
ctttttgatttggtgatcatttccatgctgttgagaatgctggacatcaaacatacaggg
ggggatgtcaaggacgcatttccttgtcatcaacaagaaatcacagtgccccacacaaat
acagacattattgacaatgaggatgatgatgtcaaggctgaaagggaaagggtcaaggac
atattcaacaaaaataatattagtaaaccagttgcaatagctgaaaacctgaggaaagaa
tttcagaaaaataaaagccagcgtaaatgctgtaagaaaggccagaaagacgaaataaag
acggctgtcagaaacgcctcgtttgccgttgatgatggagaggtatttgggttgttggga
cctaacggggccgggaaaacaacagtgattaacatgattgtagcagagattgggcccact
agaggacgggttgtagttggaggacatgatattcagtcaagcatgtctgaggctttccag
gtcatgggctactgccctcagcacgatgccctcgaggagctgatgacgctgaaggagcac
ctggtgctgtatgccaccattagaggtgtgcaggaggacaaagtcaatgaccttgcagaa
tggtttattgagcagctgaaggtacaggagcatgcaaacaaacgttccaagaaactgtca
gggggaaccaagagaaagttgagctatgccataagtatgctaggaaagcccagaatagtc
ctcctagatgagccttcaacaggaatggaccctgcctccaaaagattcctttgggatacc
attaccaatagtttccagaacaaagataggggagccattttgaccacccactacatggag
gaagcagacgccctctgttcaagagtcggaatcatggtcaatggaaagcttgaatgtctt
ggaccaactcaacatttgaaaaacaagtttggaagtggatacatactggaagtgaagttg
aaggcaggaattgcccacgagacccaagattcagtggagcagagaatgaacaagctcgag
gaatatgtcttctccatgttccctgatgctgtgattgtggagagatttggactgagagct
cagtataaaatacccaggaacaatgtcaagtctctcgcccatgtcttctcatctctagaa
gaaggcaagcggacgcatgatatggaagagtacaatttcagccagtcctccttagagcag
gtgttcctggaatttgccaaaagacagctggatgagaatgttacagatgagaatgttgat
aatgaacagaattcgctggagcaatccctgaggcttcgtacttcatctagagaacagggg
agaaatagctcccagggctcaggaaatgttgtgtga
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integrated database retrieval system
