Magallana gigas (Pacific oyster): 105335109
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Entry
105335109 CDS
T03920
Name
(RefSeq) ubiquitin-like-conjugating enzyme ATG10 isoform X1
KO
K17888
ubiquitin-like-conjugating enzyme ATG10
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg04136
Autophagy - other
crg04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
105335109
04136 Autophagy - other
105335109
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crg04131
]
105335109
04121 Ubiquitin system [BR:
crg04121
]
105335109
03029 Mitochondrial biogenesis [BR:
crg03029
]
105335109
Membrane trafficking [BR:
crg04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
105335109
Ubiquitin system [BR:
crg04121
]
Ubiquitin-conjugating enzymes (E2)
UBL-conjugating enzymes
105335109
Mitochondrial biogenesis [BR:
crg03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
105335109
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autophagy_act_C
Motif
Other DBs
NCBI-GeneID:
105335109
NCBI-ProteinID:
XP_011437144
UniProt:
K1PT50
LinkDB
All DBs
Position
7:complement(13190113..13194408)
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AA seq
206 aa
AA seq
DB search
MAAGSISEDEYWDSIIFFLTLSSKIDSKWTIVNTKDGRRFAKKTEVFILSTENKESTMND
DVIRNTELMEEQEEDAAAFQVRGNSDVEVVTYEYHILYSPSYGVPVLYFNAHTQGGKLLA
LEEIWKRVPDVYKERLSEERWTFITQQEHPLLGRPFYYLHPCHTADLMKNSPVLTDKRHY
IVSWLSAVGPVVGLKLPLEYGKLCVS
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atggcggcaggttcaatttcggaagacgaatattgggacagcattatattcttcctgaca
ctttcaagtaaaatcgacagtaaatggacaatcgtaaacaccaaagatggtagaagattc
gcaaaaaagacagaagtgtttattttgagtacagaaaataaagaatccactatgaatgac
gatgttatcagaaacacagagttaatggaagagcaagaggaagatgctgcagctttccag
gtcagagggaattctgacgtggaagtcgtgacttatgaatatcacatcctgtatagcccc
agctatggtgtgccagttctgtacttcaatgcccacacacaaggtggaaaacttctagcc
ttagaggaaatctggaaaagggtgccagatgtatataaagagagattgtcagaagaaaga
tggacatttattacacaacaagaacaccctttacttggccgtccattctattacctacat
ccatgtcatacagctgacctgatgaaaaactctccagtcctaacagataaaagacattac
attgtttcctggctgagtgctgttggtcctgtggttgggttgaaacttcctctggagtat
ggaaaactttgtgtcagctga
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