Magallana gigas (Pacific oyster): 105335140
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Entry
105335140 CDS
T03920
Name
(RefSeq) toll-like receptor 4
KO
K18808
toll-like receptor 13
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
crg04054
]
105335140
Pattern recognition receptors [BR:
crg04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
105335140
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
TIR_2
LRR_4
TIR
Smim3
LRR_14
Motif
Other DBs
NCBI-GeneID:
105335140
NCBI-ProteinID:
XP_011437200
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Position
2:complement(33746127..33753230)
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AA seq
859 aa
AA seq
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MDIMLTFKFLWVMMTLCMYVRAEEKCTDDANCLYSYAGKMSADCSSRNLAFPPCFNETFE
LEAINLRDNRLNHVPDNMPKNIEFLDLSYNNIQDNLVYLQNYTRLRHLNLYHNQIDYASF
HRQVTEMPNLQFISLKHNKQLSSYPRYLFAGFGSLHHLRINGLPDGNFGDMFPNGEVKSL
KILDVSGYDGFCKISQLKASAFAKFNLTHLNLSQCDLLYIETGSLSSQKHLEFLDASNNE
RLGFRGLRIIAHDLQNSTIKVLKLNKVHCTFGLGTILLLNHTTYLNKTSLEELYLDSNRI
EIMETGVITYHLPKSLKYLSLGDNKIDNGIYHLELSALHNLQTLNASFQLFSHNNFFDGC
YDYRQSCHILPEFAVYPQEFTVYPSAVKSLRNIYPWYQHNAFSGLFPKPPNFTYYLPRSL
TTIFANDMKFQFFVIRQLFFGQCNVTHLHFQNNFIYEMHVPTLGCSNLVYLDFSNNYCRY
FTPHMLKIQSQLEVLNFSRNDLGHIFQDDNKGELLGRNLKLTVLSLHDNKITTLPRNVFI
NNSMIKILNISRNRLDTWSVDLRHMYQLQFLDLSFNLLSELDESAIDLLPTHGEFKISFQ
GNPLSCTCKNLFFLNWINNIHLDRLSHIANTTCIYRNGSTLSLQNLPDILNILQKDCSSY
SVIIILASSFICFVTSFIIYRIIYRYRWKILYIYYLVKRAIFPENKKTEGKRFYESDVFI
SYATHQRDFSISMARKLENKGLKVRIHDRDFLPGIDIAENITNAIHNSRRTVVVMTSHFL
KSHWCMFELNMARMESIYSRGGENFLLLILLEKNVIKDMPRSLFDIIESKSYLEYPDDDS
FQSPDAFWANLEDAINENE
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atggatatcatgttgactttcaaattcctttgggtaatgatgactttatgtatgtatgtt
cgtgcggaagagaagtgcactgatgatgctaattgtttgtattcctacgctgggaaaatg
tctgcggattgttcgtcacgtaatcttgcatttcctccttgcttcaatgaaactttcgaa
ttagaagccattaatctgcgagataatagattaaatcacgttccagataatatgccaaag
aatatagaatttcttgatttatcgtacaataatatccaagacaatttagtctacttgcag
aactacacgcgactgcgacatctgaacttataccacaatcaaatcgattacgcaagcttt
catcgacaagtgaccgaaatgccaaacttacaattcatatctctcaaacataataagcag
ctttcctcctatccgagatatttatttgcaggatttggttcgttacatcacttgcgtatt
aatgggctacctgatggaaattttggggatatgtttccaaacggcgaagtcaaaagtttg
aaaattcttgatgtctccggatatgatggattttgcaaaatctcacagttaaaagcgtcc
gcgtttgctaaatttaatttgacacacttaaatctgtctcagtgtgatttgttgtatatt
gagaccggttctttatcgtcgcagaaacatttggaatttttagacgcttcgaataatgaa
cgacttggattcagaggtttacgaatcatagcacatgatcttcagaacagtacaatcaaa
gtactaaaactcaacaaagttcattgtacgtttggactgggtacaatcttgcttttgaac
catacgacttacttgaacaaaacctcactcgaagagttgtatttagatagtaacagaata
gagattatggagacaggggttattacatatcatcttcctaagtctttaaaatatttgtct
ttaggagacaacaagatagacaacggtatttatcatctagagttatccgccttgcacaat
cttcagacactcaatgcaagttttcaactcttttcgcacaacaatttctttgatggttgc
tacgattaccgccagtcatgtcatattttaccagagtttgccgtttatccacaagagttt
acagtttacccgagtgccgttaaaagtttgaggaatatttacccgtggtatcagcacaat
gctttctctggattattcccaaagcctccgaatttcacatattatttgcctagaagtttg
acaacaatatttgcaaacgacatgaaatttcaatttttcgtaattagacaactgttcttt
gggcaatgcaatgttacacatcttcactttcagaacaattttatatatgagatgcacgtt
ccaacgttagggtgtagtaacctcgtgtatttagacttctccaacaattattgcagatat
tttacaccacacatgttaaaaattcaaagccaattagaagtgctaaatttttctcgaaat
gatttgggtcacattttccaggacgataacaaaggtgaattgttggggagaaacctcaag
cttactgtcttgagtttacacgataacaaaataactactttacctcgaaatgtatttatt
aacaactcaatgataaaaattcttaatatttcacgcaacagactggacacatggagtgtt
gaccttcgtcacatgtatcaactccaatttctagatctatcgtttaaccttttatctgag
ctcgacgaatccgccattgacttattaccaacccacggtgaattcaaaattagtttccaa
ggaaatcctctgtcatgtacgtgcaaaaacctattctttttgaactggataaacaatatt
catctggatagattaagtcacatagcaaatacaacatgcatttacagaaatggatcaact
ttatcacttcaaaacctgccagacattttgaatatattacagaaggattgttcctcatac
agcgtaatcattatattggcatcttcattcatttgcttcgttacgagttttataatatac
cgaatcatatatcgataccgatggaaaattctatacatttattaccttgtgaagcgggcc
atatttcctgaaaataaaaaaacagagggtaaaagattctacgaatctgacgtgtttata
tcatatgctacacaccagagagacttctcaataagcatggcaagaaagctagaaaacaag
ggattaaaagtccgcattcacgaccgtgatttccttccggggatagacatagctgaaaat
attacaaacgcaattcacaacagcagacgaactgtggttgtcatgacgtcacattttctg
aaatctcattggtgcatgtttgagttgaatatggcgcgcatggaaagcatatactcccgc
ggaggagaaaactttcttttactaattctgttagagaaaaatgttatcaaagatatgccc
cggtccctttttgacattatcgagagtaaatcatacttagagtacccggatgatgatagc
ttccagagtccagatgcattctgggcaaatttggaagatgcaataaatgagaatgaatga
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