Magallana gigas (Pacific oyster): 105335165
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Entry
105335165 CDS
T03920
Name
(RefSeq) HEAT repeat-containing protein 1
KO
K14550
U3 small nucleolar RNA-associated protein 10
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
105335165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
crg03009
]
105335165
Ribosome biogenesis [BR:
crg03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
105335165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BP28CT
HEAT_HEATR1
U3snoRNP10
HEAT
HEAT_EF3_N
HEAT_2
HEAT_EZ
TOR1L1_N
ARM_RUK
Motif
Other DBs
NCBI-GeneID:
105335165
NCBI-ProteinID:
XP_034311475
LinkDB
All DBs
Position
7:3559401..3575116
Genome browser
AA seq
2070 aa
AA seq
DB search
MTSLAKQLERLAVPHIRAVYGEDKRRKSLLFDPKEAAALDKEAIYAIGTNGIAELQAIDP
VFDAYQEVLFGESTMTFQRSVQTAEVNAQIDETVESFLQRLTPYCLLKPAHKALEWLIFR
FNINIYNMDAFMVCLLPFHESKIFIRAVQLLNLKSKTATKWDWLLPIQASGVHLPRQTLI
NHCNSNTGFLSFLCERLYKTIKEIVKKDDGDKLRVIFSFYMSTVVGALEFGGATENFIAA
ILPHLSRGLKSKVAQYRAATYMILGQLVSKTNLQGDLLKTLLSALFKKSILSLEKETMTC
AVLIFQQQKISNLPARSFKHICRQPGLVETLKTMATEGICDKLTLAFLERLVVMAVKQDS
EMSMSESSDTEAISSPPPYLDLLHDFLSSVPLSQQVADSLTKKIIENYLMCANVTDDDDD
LEDLSRKHKKTVQLLEDRYPTSLDRTVQELLEGEEDEGVRGKIQDFLNLSVLSVKHQHLS
DIEGTLTLSLNHRTPSIRVSALQHLLKNADKCDPDYVADVLMTRLADDSSEVVDKILDVG
QSLWSMLSDRDQLCSLLGKIVLRCQPWSELGTKALVVLCGCDPKLQPSVLLLLFPRFLLC
TPDDVNFLRDLCETNLAKSNQVIKALAQKLKKKALGKKTMSEEDLARVSVDVTEWLAAAV
IKMPDCEKFLTQMVKTADGLRSKCQLAMFLNTAITLLTDPKDKIHWCGKQLHLLHQLHPE
GQPRSDWEETVAMVTETCQSLVFHQTQGNAISLNLFADLINLIPDHFKDKTEADYWNFDD
EALTLTVRLFDYLILMSTNSPCRQGYRKLVAKFLQHLKNNDVRMKFLGTLWTQHCNDLSE
SSGVKVSLQIQALLVGKQLMQDPKFKATDSVIINLLLTLTSPYPGIRQTAIECLKLLSDK
DNAGLGMFAPLVKHVLQCEVEIESDQEYLKQAVFAVMGNEPKKSKRRSHAGKKAEETLVS
VVVDILQNSATPEYIRNSLLKVTALHNNKKLLGELLPVLRSLLLAAQGDRPSPLVLDSCG
LLIQRFTQDTCSLLDSDPQALTLVLEMLSSPVTKVQELMISQVSGEFYEGLTPETRHKVL
SCLFDIWVKTQSPDTVKVIKKTLKHLVLESGHVIEELNKCLQTTPSASTVKERKRHRKSD
VRGQAEEDIFEQLPWQRVVVVLETIQSKKKINDYVQLLPTLFKILSEVLNSDQHASAEYI
KQLLLSVVDEVCQRAIRHQLVPDLKKESSFNIDLIVSAIRTSSNPQTHHKALLVLSTASK
IFPEDLLHKVMSVFTFMGANVMRHDDQYSFHVINRILETVVPALVTACEQKEALAGGQSK
EEVITMVMQVFVDAYTHIPEHRRLMLFSRLVEIVGGDNFLWRCVLLKMAHEITRPASEPT
EEDDAEMQFDLNLLFQFSVTTQINSIAAMITYVSGLPVDKPTESTPKRRKPGKQNKDGVE
IFKVETHTSKQLRHFKYRTIRLLLSWCTSSTLLQQLAACEEGEITSGFHHLVQTIMTYIC
ALIELRVEDQTLAKFYRALTHKIYDLLDKVVGLLPETMLLQVIQDLMQHSIPNIQRKSME
LLNSFLQQKEHTMETSLLGVVDRLLRVCSSENAEVTTVQTALYSLKLLCRRIGANHPQMF
IKVLKTSVEIFSSDGVNQSLQASAVLCIAEVCSSLKAHIIAQLSTFMPKIVSCLKDSQLL
EGNELFLLSIVTAVQKVMENLALFLSPYLQDIVTQTCCLSGNQADALQKAPIQQKLKAIR
SSMATSLSPRVLLGILPDCYEKLLTTSPKGIESMMTMLTEHVSHMKKEDLSSHLVQLQGF
YLTCLDVQSQSQGDVEDLEDAVIDTIVTTVMKLSEATFRPMFYKMFDWAKREEEQRHRIL
VFYKMADRLAEKMQSLFTIFASHIVVHAAQVLKDNNKQITGNDFYGSSKKGRRKAHKLLV
HVCDCLYKCFLYDTEGFVTKERFDTLLQPLVDQLENVDDGTLSKERVSEHLVPCIVQFGV
ATQDDSLWKTLNYQILLKTRHTSPQVRYAALIAVDEFHKRLSEDYMPLLPETIPFLAELM
EDEEEEVEKMCQSVISQMERTLGEPLQKYF
NT seq
6213 nt
NT seq
+upstream
nt +downstream
nt
atgacgtctttggcaaaacagttggaacgcttggcagtgccacacattcgagctgtttat
ggcgaagataaaaggagaaaatccctcttgttcgatccaaaggaggctgcagcattggac
aaagaagccatttatgcaattggtacaaatgggatagctgagttgcaggctatcgatcca
gtttttgatgcatatcaggaagtgttgttcggtgaatcaaccatgaccttccagaggagt
gttcagacagcagaagtgaatgcccagattgatgaaacagttgaatcttttctccagaga
ctaacaccatattgtttactcaaaccagcacacaaagcattggagtggttgattttcagg
ttcaatatcaatatctacaatatggatgcctttatggtctgcctgttaccattccatgag
agcaagatattcatacgagcagttcaacttctaaatttaaagtccaaaaccgccactaag
tgggattggctacttccaattcaagcctctggtgtgcacttgcccagacagactttgatc
aaccattgtaactcaaacactggcttcctctcctttctctgtgagagactgtacaaaaca
atcaaagagatagtgaagaaagatgatggagacaaactaagagttatcttctccttctac
atgtccactgttgtgggggcactggagttcggtggagccaccgagaacttcattgccgcc
atcctcccccacctaagtcgcggtctgaagtcaaaggtcgctcaatacagggctgccacc
tacatgatattgggtcagcttgtctcaaagaccaacctacagggagatctgttaaagacg
ttgttgtctgctctatttaagaaatcaattttgtctcttgaaaaagaaactatgacctgt
gcagtgctgatatttcagcagcagaagatctcaaatctcccagcaaggtcctttaaacac
atctgtcgacagccaggtctggtagaaaccttaaagactatggctacagagggtatttgt
gacaaactgaccttggctttcttggaaagacttgttgttatggctgtgaaacaggactct
gagatgagtatgagtgagagcagtgatacagaggccatctcgagccccccaccttatctt
gatctcctccacgactttctgtccagtgtccctctcagtcaacaggtggcagacagcctc
actaagaaaattatagagaactatctcatgtgtgctaatgtcactgatgatgatgatgac
ttggaagatctcagcaggaagcacaagaagacagtccagctcctggaggacaggtacccc
acatcgttggacagaacggtgcaggaattgttggagggggaggaggacgagggagtgagg
ggtaagatccaggacttcctgaacctgtccgtgctgtccgtcaaacaccagcacctgtca
gacatcgagggcaccctcaccctgtctctcaaccataggaccccctccattcgagtcagc
gccctgcagcacctgctgaagaatgcagacaagtgtgaccctgactatgtagccgatgtg
ttgatgaccagacttgcggatgattccagtgaagttgtggacaaaatccttgatgtggga
cagagtttatggagtatgctcagtgacagagaccagctgtgcagcctgctgggtaagatt
gtcctgcggtgtcagccctggtcagagctggggaccaaagccctggtggttctgtgtggg
tgtgaccccaagctgcagccatctgtcctcctccttctgtttccacggtttctgctctgt
acacctgatgatgtcaattttcttagagatttatgcgagactaacttggctaaaagtaac
caagtcatcaaagctttggcacagaagctgaagaagaaagcattaggtaaaaagacaatg
tctgaagaggacctagccagggtttctgtggatgtgacagaatggttagctgctgctgtc
ataaaaatgccagactgtgagaaatttctgacacagatggtgaagacagcagatggtctg
agatctaaatgtcagctagcaatgttcctcaacacagccattacacttctgacggaccct
aaagacaaaatccactggtgtggtaaacagctacatcttctgcatcagctccaccctgaa
ggtcagccaagatcagattgggaggagactgttgccatggtgacagagacctgtcagagt
cttgttttccaccagacacagggaaacgccatcagtctgaatctgtttgcagacttaata
aatctgattccagatcatttcaaagataaaacagaggctgattactggaactttgatgat
gaggctctgaccttgactgtgaggttgtttgattacctgattcttatgtctactaactcc
ccctgtaggcagggatatagaaaactggtcgccaaattcttacagcatctgaagaataat
gatgtcagaatgaagtttcttggaactctgtggacacagcattgtaatgatctcagtgaa
agctcaggggtcaaggtcagcctacaaattcaggccttacttgtaggaaaacaacttatg
caggatccaaagttcaaggccacggattcagtcataataaacctgttgttaaccttgacg
agtccataccctggaattcgtcagaccgccatagaatgtctgaagcttttgagtgataag
gataatgcgggtcttgggatgtttgccccattggtgaaacatgtattgcagtgtgaggtg
gagattgaatcagaccaggaatatctaaaacaggcagtatttgctgtaatgggcaacgaa
ccaaagaagagtaagcgaaggtctcatgcaggtaaaaaggcagaggaaaccctggtcagt
gttgtggtggacattctacagaactcggccacgcctgagtacatccggaacagtctgcta
aaggtcaccgccctccataacaacaagaaacttctgggagagctgctgccagtcttgagg
tccttgttactggccgctcagggtgacagaccctcacccctcgtcctggatagctgtggg
ctcctgatccagaggttcacccaggacacctgctccctgctggactctgacccccaggca
ctgaccctggtactagagatgttgtcaagcccggtcacaaaagtacaagaactgatgatt
tcacaggtgagcggtgaattttacgaaggattgaccccggagactcgtcacaaggttttg
tcgtgtctgtttgatatctgggtgaaaacacagtctccagacactgtcaaagtgatcaag
aagacactgaaacatttggtattggagagtggacatgttattgaggaactcaacaaatgt
ctgcagacaacaccatcagcctccaccgtcaaagaacgcaaaagacacaggaaatctgat
gtacgcggacaggcagaggaagacatttttgaacagttgccatggcagcgagtggttgtt
gtccttgagaccattcaaagcaagaaaaaaatcaacgactatgtccagcttttacccacc
ttgtttaagatactatcagaggtgttgaactcagaccagcatgcctcagctgagtacatc
aagcagctgctgttgtctgtggttgatgaagtgtgtcaaagggccatcagacatcaactt
gtaccagatttgaagaaggagtcgtcctttaacattgatctgatagtgagcgccatcagg
acgtccagcaatccacagacgcatcacaaagctctgctcgtcctgtccacagcatccaaa
atattcccagaagatcttctacacaaagtcatgtctgtgttcacctttatgggagcaaat
gtgatgcgccatgacgaccagtacagtttccatgtcatcaatcgtattctggagaccgtg
gttcctgccttagttacggcatgtgagcagaaagaggccctcgctggaggtcagagcaag
gaggaggtcatcaccatggtgatgcaggtgtttgtggatgcttacacccacatcccggag
caccgccgcctgatgctgttctcaagattggtggagatagtaggtggagacaacttcctg
tggaggtgtgtccttctaaagatggcgcatgaaattacccgtccagctagtgaacccaca
gaggaagatgatgctgagatgcagtttgacttgaatctgttattccagttttctgtaaca
acacaaatcaactcaatagctgccatgataacttacgtatcaggtctgcctgttgataaa
cccacagagtcgacacccaagagaaggaaaccagggaaacagaataaggatggggtggag
atcttcaaagtggagacccacacctccaaacagctcagacatttcaagtaccggacgatc
cgactactgctgtcctggtgcacaagctctaccctactacagcagttggcagcttgtgaa
gaaggggagataacctctggcttccatcacctggtacagaccatcatgacctacatttgt
gccctgatagagctgagggtggaggatcagaccctggctaagttctaccgtgccctaacc
cacaaaatatacgacctccttgacaaggtggttggacttctcccggagaccatgttactt
caggtgattcaggatctgatgcagcactccatccccaacatccagaggaagtcgatggag
ctcctcaactccttcctgcagcagaaggagcacaccatggagacaagcttactgggggtt
gtggacagactgttacgtgtatgttcctcagagaacgcagaggtcaccaccgtacagacg
gccttgtacagcctcaagttgttgtgtagaaggatcggtgccaatcatccacagatgttc
atcaaggtgctgaagacttcggtggaaatattcagtagtgacggcgtgaaccagtcgctc
caggcgagtgctgtgctgtgtatcgcagaggtctgtagctcgctgaaggcccacatcatc
gctcaactgtccacgttcatgccaaagattgtctcatgtctcaaggacagccagctgctg
gaggggaatgaactgtttctcctgagtatcgtcacagcagtgcagaaagtaatggagaac
ttggcactgttcctcagcccttacctgcaggatatcgtcactcagacctgttgtctctct
ggcaaccaggcagatgcactacaaaaagcacccattcaacagaagctcaaggctatcagg
agctccatggcaacctccctttctcctcgagtactcctcgggattttacctgactgttat
gaaaagctactgacaaccagcccaaaagggatagagtcgatgatgaccatgcttacagag
catgtcagtcacatgaagaaagaggacctcagcagtcacttggttcagctccaaggattc
tatctcacctgtctggatgtacagtcacaatctcagggggatgtagaagatttagaggat
gcagtgattgacaccattgttaccacggtgatgaagctgtcggaggccacttttagaccc
atgttttacaagatgtttgattgggccaagagagaggaggaacagaggcacagaattctt
gtcttctacaaaatggccgataggctggcagagaagatgcagagtctgtttacaatcttt
gccagtcacattgttgttcatgcggcccaggtgttaaaggacaacaacaaacaaattaca
gggaatgatttctatgggtccagtaaaaagggacgaaggaaagctcacaagttactggtc
catgtctgtgattgtctgtacaagtgcttcctgtatgacacagagggcttcgttaccaag
gagagattcgacaccctgctacagccattggttgatcagctggagaatgtagacgatggg
acgttatccaaggagagggtgagtgagcatctggttccctgtatcgtacagttcggtgtg
gcgactcaggacgattccctctggaagaccctgaactatcagatcctgctcaagacccgc
catacttcaccacaggtacgttatgcagctttgattgcggtggatgaattccacaaaagg
ttgtcggaggactacatgccattactgccagagacaattccattccttgctgaactcatg
gaggatgaggaagaggaagtagagaaaatgtgtcaatccgtcatcagtcaaatggagaga
acactgggagagccattgcagaaatatttctga
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integrated database retrieval system