Magallana gigas (Pacific oyster): 105335265
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Entry
105335265 CDS
T03920
Name
(RefSeq) lys-63-specific deubiquitinase BRCC36
KO
K11864
BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
105335265
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
crg01002
]
105335265
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
crg04121
]
105335265
03036 Chromosome and associated proteins [BR:
crg03036
]
105335265
03400 DNA repair and recombination proteins [BR:
crg03400
]
105335265
Peptidases and inhibitors [BR:
crg01002
]
Metallo peptidases
Family M67
105335265
Ubiquitin system [BR:
crg04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
105335265
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
105335265
BRISC complex
105335265
Chromosome and associated proteins [BR:
crg03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
105335265
DNA repair and recombination proteins [BR:
crg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
105335265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCC36_C
JAB
Prok-JAB
UPF0172
Motif
Other DBs
NCBI-GeneID:
105335265
NCBI-ProteinID:
XP_011437379
UniProt:
A0A8W8IWK8
K1R0R3
LinkDB
All DBs
Position
8:15372066..15381537
Genome browser
AA seq
263 aa
AA seq
DB search
MVVESVHLEADAYMVCLTHALSTEREEVMGLLIGEVDENRVLHIFSVIMLRRSDKQPDRV
EISPEQLSDASSKAERLAQQYNRPLRVLGWYHSHPHITVWPSHVDVRTQAMYQMMDEGFI
GLIFSVFNEDKSTKSYRHQLTCFQSINQAMDGYPPQYARVEVPLHIVPSSGLGKACLESL
IELPKILCQEEEEEYKKATADPELDLITKLQNSSVFTKSLCHIMEVMHGPLIQSLESRLE
QNNAKIAELEKRQAEIQKLIDRN
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atggttgtagagagcgtgcatttggaggctgatgcctatatggtgtgtttaacacatgca
ctatctacggaaagagaggaggtgatggggctactcataggagaggtggatgaaaataga
gttctacacatcttctctgtgattatgttaagaagatcggacaaacagccagacagagtg
gagatctctcctgaacaactctctgatgcctcgagcaaggctgagagactagcccagcag
tataaccgacctttgagagtcctaggctggtatcactctcacccccacatcacagtctgg
ccatcacatgttgatgttaggactcaggccatgtatcagatgatggatgaaggattcatt
gggcttatcttctctgttttcaatgaagacaaatctacaaagagttacagacaccagttg
acctgtttccagtccatcaatcaagcaatggatggctacccaccacagtacgctcgagtc
gaagtccctctccacattgtccccagctcaggattaggaaaagcgtgtttggaatctctg
attgaacttcccaagatcctctgtcaggaggaagaggaagagtacaagaaggcgacggcc
gaccctgaactagatctgatcaccaaactccagaactcctcagtgtttacaaaatctttg
tgccatatcatggaagtcatgcacggaccattaatacaatccctagagagtcgcttggaa
cagaacaatgcaaagatcgcagaattagaaaaaaggcaagcagaaattcaaaaactcatc
gacaggaattag
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