Magallana gigas (Pacific oyster): 105335373
Help
Entry
105335373 CDS
T03920
Name
(RefSeq) DDB1- and CUL4-associated factor 1 isoform X1
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
crg01001
]
105335373
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
crg04121
]
105335373
Enzymes [BR:
crg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
105335373
Protein kinases [BR:
crg01001
]
Serine/threonine kinases: Other
Other
105335373
Ubiquitin system [BR:
crg04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
105335373
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_THOC3
LisH
Beta-prop_WDR5
Beta-prop_WDR3_2nd
EIF3I
LisH_PAC1
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_1st
WDR55
WD40_CDC20-Fz
Motif
Other DBs
NCBI-GeneID:
105335373
NCBI-ProteinID:
XP_065937872
LinkDB
All DBs
Position
4:26630048..26653601
Genome browser
AA seq
1456 aa
AA seq
DB search
MAALDSLAQLNSLLEEWVREHNNGSFNVMNTLHRMAELLERETEEYYKMDPDPFDDRHPG
RAVPTCALGHLMKTLFKSEEFMNKLVSTYLMSNRDNTELHIAASRLLLDVMPGLETTIVF
QETDGLVRRLLHWAEFCEDPLRSYATGLLAGAMELQDVADKFKEANGTLVPLMLTRLHKL
KCDYEKENQENTSSHSHEDNQRHFGIFGQEPKQSPEKKVSSESPTGSHSGGDNPQDSSQS
CPTRDEKSVKSESNSRRESMKRALSPSYYSDDLYRFKRGRIREDSINECSNSSWAEMKCY
VIGTYSLMPLSIAMKQRVILQYLTPMAEYQELIGAAFEHNALDLVFFYMDLKKNADVRLA
FEAIKYTANLLCHKKFAIEFLSMQGVQKALQVPRPSVAACGVSLCIYYLSYFEDAMERVC
LLPDRTLQDLVSYTLWLLECSHDSSRCHAAMFFGQAFPYRVILNLFDQKDGLRRLFNVIS
TLQILDVDDQREVGDDQIFTMKQLIRHVSLALKKYFEAHICHKVDEIKRSHARSDDNNSP
IHEIPPYKALKLTPELVQENIEIMMELMPIRVHWAPEITCHKLGGIKLMCQLIALAPTWN
HFTGKTEMIKNVLDVINVLVATPKSQLALLESVPMYNNISTPAISVLIGLAEGELQDPEV
QKSALNIIINCVCGPVERLGGGLGRFVAGSKKRINLKVGEDVLSKMWNGVRVNNGIMALL
KLLSIKTPITDADCIRALACKALVGLSRSETVRQIMSKLPLFNNGQIQLLMKEPVLQDKQ
QEHVKFCKYANELLERVLGKKSSANLDASLEDIRRADIVAQSRITFQEKELLQLIHSHLQ
SKGLADAAAALQREANLPRSITPPNVLPAQPCVFSSPHLASPRISRQISHSAAAHLSGTP
DIPSTSSGYFSNSSSQRESPTNPGSTPGTPGPIRFHIGRHNQQFSPGLVPVRGSASKSRF
STEKDCSLNSPVWRSKGHLKGQGDYDMTLDKIVTEYLRKQHALCRNPVTTCPPMSLFKPH
RCPEPRGRRMAPLNATSRIYNRMLGPKVGGIGGASVDRKFIYSRFRPCQSYRNSDDGGML
CCSFSRDEQYLMYGTFWGDIKLVSLQSGEETASYNFHQVPIEDFQQAKDHDVLLVSYADN
GSGVWTYGDVVENKYSFEDSHIEFSKLIQDRIIGTKEETANIYDVSTGQRILKLFEANKA
NNYRENRATFNPTDELVLNDGVLWDIRSGKSIHKFDKFNDNISGVFHPMGLEIIINSEVW
DIRSYHLLHTVPALNQCQIRFNNRGDIIYAIYVMDEEMDDFKGRSPYSSTFRTFDSTDYS
SIATMDVRSKSISDLCTDRSDCYLAVVENLNTELGTEEFVCKLYEVGKLRDEEDDQPEDD
ELDEVDDEDDDDEDLLNDFNDSNDDDFFTDGDDDDDDEDDEDNEEDNGDFSFSDMGSDDD
DDDGDDIDDDALFELL
NT seq
4371 nt
NT seq
+upstream
nt +downstream
nt
atggctgctctggattctctggcccagctgaacagtctgttagaagaatgggtgagggaa
cacaacaatggctccttcaacgtgatgaacactctacacaggatggccgagttactagag
agagagacagaagaatactataagatggaccctgacccctttgatgacagacatcccggg
cgggcagtacctacgtgtgctctgggtcacctcatgaagactttgttcaagagtgaagag
tttatgaataagttagtgagtacctacctaatgagtaaccgtgacaacacagagctgcac
atcgccgcatcacgtctgttgttggacgtcatgccgggactagagaccaccattgttttc
caagaaactgacgggttggtgagaagactgctgcattgggctgagttttgtgaggacccc
ctcagatcttatgccacagggcttcttgctggggccatggaactccaggatgtcgcagac
aaatttaaggaggccaatgggacattggttccactgatgttgacccgcctccacaaactg
aaatgtgactacgagaaagaaaaccaggagaacacatcctctcacagtcatgaggataac
cagagacacttcggtatatttggtcaggagcccaaacagtcgcccgagaaaaaagtctcc
tccgaaagcccgacggggagtcacagcggaggagataacccccaggactcgagtcagagc
tgtcccacacgggacgaaaagagcgtcaaatcggagagcaacagcaggcgcgagtccatg
aaacgggccctgtcgcctagttactatagcgatgacctttacagattcaagcgaggtcga
atcagagaggattccatcaatgagtgcagtaacagtagctgggccgagatgaagtgttat
gtgatagggacctacagtctgatgccgctcagtatagccatgaaacagagggtcattcta
cagtaccttacacccatggcagaataccaagagttgattggtgcagcctttgaacacaat
gcattggacctggtgtttttctacatggacctgaaaaagaacgcagatgtcagactggct
tttgaagcaatcaagtacactgctaacttgctgtgtcacaagaagtttgccatagagttc
ctgtccatgcagggggtccagaaagccctgcaggtgccccgcccctctgtggctgcctgt
ggggtctcactctgtatctactacctctcctactttgaggacgccatggaaagggtctgt
ttgttaccagacaggactcttcaagatttagtcagctacactctctggttgcttgagtgt
tcccatgattcaagtcgctgtcatgctgccatgttttttggacaagcctttccctacagg
gtgatcctaaatttgtttgatcaaaaggatggactaaggagactttttaatgtgatcagc
accctacagatcctggatgtggatgaccagagagaggtgggggacgaccagatcttcacc
atgaaacagctcatacgccacgtctcgctcgcgctcaagaaatacttcgaggcccacatc
tgtcacaaagtggatgagatcaagaggtcacatgctcgcagtgatgacaacaactcaccc
attcatgagattcctccatataaggctttgaaattaacaccagaattagttcaggagaac
attgagattatgatggagctgatgccaattcgagttcattgggcgcccgaaatcacatgt
cataaactgggcgggatcaaactaatgtgtcagctgatcgcactggcccctacgtggaac
cacttcactggaaaaacagaaatgataaagaacgtccttgatgtgatcaacgtgttggtg
gccacacccaagtctcagctggccctcctggagtctgtccccatgtacaacaacatctcc
acaccagccatcagtgtgctgattggtctagcagagggagagctacaagatccagaggtc
cagaagtctgccctcaacatcatcatcaactgtgtgtgtggccccgtcgagaggctggga
ggaggactagggagatttgttgctggatctaaaaaaagaatcaacctgaaagtgggagaa
gatgtcctcagtaagatgtggaatggggtcagggtcaacaatgggatcatggctctgttg
aagttattgtccatcaagaccccaattacagatgcagactgtatcagggcgctggcgtgt
aaggcattggttggtttgtctaggtcagagacagtgagacagatcatgagtaaacttcct
ctgttcaacaacggacagattcagttgcttatgaaagagccagtgttacaagacaagcag
caagaacacgtcaagttttgtaaatatgccaacgagctcctggagagagtgctcggaaag
aaatccagcgccaatctagacgcctccctggaggatatcagaagggctgacattgttgct
caatcgaggatcacattccaagagaaggagttactacagctcatacacagtcacctacag
tccaaaggattagcggatgcagcagctgctttacagagggaggccaacctcccccgcagt
atcactccccccaacgtcctacccgctcaaccctgtgttttctcctccccacatttagcc
tcccccagaatttccagacaaatcagtcactctgccgctgcccacctctccggcacccct
gacatcccgtccactagttctggttactttagcaactccagcagtcagagggagagtccc
accaaccctggttccacccccggcactcctggaccaatcagatttcacattggtcggcac
aaccagcaattctcacctggccttgttcctgttaggggctccgccagcaaaagtaggttc
agcacagaaaaggactgcagtcttaacagtcctgtctggaggtcaaaagggcatttaaaa
ggtcaaggagactatgacatgaccttggataagatagtgacagagtacctccgtaaacag
cacgctctgtgtcggaatccagtcaccacctgtccccccatgtctctgtttaaaccccac
cgctgtcccgagccgcgaggaagaagaatggcgccactcaatgccacatccaggatatac
aatagaatgctggggcccaaggtgggggggataggaggtgctagtgtggacaggaagttt
atctacagtcggtttaggccctgccaatcctacagaaactcagacgatggaggaatgctg
tgttgttccttttcaagagatgagcaatatctgatgtatgggacattctggggagacatc
aaactagtcagtctgcagtcaggggaggaaacagccagctataactttcatcaggttccc
attgaagacttccagcaagccaaagatcatgatgttctattggtcagctatgcagacaat
ggatcaggggtctggacctatggggatgttgtggaaaacaagtacagttttgaagacagc
catatagagttcagtaaactgatccaggaccggatcatcgggaccaaagaggaaacagcc
aatatctatgatgtctcaacaggtcaaagaattctcaaactctttgaagctaacaaagcc
aataattaccgggaaaatcgtgcaaccttcaaccccacagacgaactggtcctaaacgat
ggggtattgtgggatatacgcagtggcaaatccatccacaagtttgacaaattcaatgac
aatatcagcggagtctttcatccgatgggtctggaaatcatcatcaactctgaagtttgg
gacatccggtcctatcatctcctgcacacagtccctgccttaaaccagtgccaaattcgc
ttcaacaaccggggcgacatcatctacgctatctatgtgatggatgaggagatggatgac
tttaaaggaagaagtccgtacagctccaccttcagaacgtttgactccacagactacagt
tcaattgccaccatggatgtaaggtccaaaagtatatccgacttgtgtacagatcggtcc
gactgctacctagcagtggtggagaatctgaacacagagctgggcactgaggagtttgtt
tgtaagctatacgaggttggaaaactccgagacgaggaagatgatcagccagaagatgat
gaacttgatgaagtggatgatgaagatgatgatgatgaagatcttttaaatgatttcaat
gactcgaatgatgatgacttctttacagacggtgatgatgacgatgatgatgaagatgat
gaggacaatgaagaagataatggagacttctcgttcagtgacatgggcagcgatgatgat
gatgatgacggagatgatattgatgatgacgctttatttgaactcttatga
DBGET
integrated database retrieval system
