Magallana gigas (Pacific oyster): 105335511
Help
Entry
105335511 CDS
T03920
Name
(RefSeq) PDZ and LIM domain protein 7 isoform X3
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
105335511
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
crg04990
]
105335511
Domain-containing proteins not elsewhere classified [BR:
crg04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
105335511
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
PDZ
PDZ_6
DUF4749
PDZ_2
DUF7479
Nab2-zf4
Motif
Other DBs
NCBI-GeneID:
105335511
NCBI-ProteinID:
XP_034314657
LinkDB
All DBs
Position
7:43821850..43836248
Genome browser
AA seq
553 aa
AA seq
DB search
MASVLTLEAKLERVDPTTPWGFRMQGGKEFGIPLTILKVNQGSLAAKCGLQQGDIILKIG
SQETTNHKHKEAQDLIIGSGNKLDLLLQRIREKKSNNNRGAPAPQHTYEKFATPSFNSYS
SPSGAPQAGSQNYNTAAKPFGSPAPRPDVDAVTQQTSQLSFAPKPAAVPAAPPPPPPMQG
QGPGFYSATPPPPPPAQTQGPGFYSAAQKYADNEEKPTFAQHQSRSFKFLQGMMDSGQEP
PKTLRPSPGQVVRSVSPSTTQNNFNSKPRQFNTPQGMYSEESTNSALKMARDQPSTPKAP
PAPAQSSAPKPGVWTPPAAPTAKPFTPNVQPPAPAAPGGPKMGPPRNPTGVNAVRAKKGE
ATIFKSGDSVPGITRIPVCSSCSISIRGPFVVALGKTWCPDHFVCQNPRCGQKLLDIGFV
EEGGFLYCEKDYEQYFAPTCTKCGKPIVGECVNALQKTYHPVCFICYQCKQPIGGNQFHL
EDGNPYCENDWRQMFQTMCKGCDFPIEPGDHWVEAMGNNFHSECFNCSTCGVNLEGQPFF
AKGGKPYCKKHTR
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggttctaactttagaggctaaattagaacgggtggatcccacaacaccatgg
ggatttcgaatgcaaggaggaaaggagttcggaattcccttgacgattcttaaggtaaat
caaggaagtcttgcagctaagtgtggacttcaacaaggggacattattctgaaaattggc
agccaggaaacaacaaatcacaagcataaagaagcccaagacctgatcattggctctggc
aacaaactcgatctccttctgcagagaatccgtgaaaaaaagtcaaacaataatcgaggt
gctccagccccccagcatacttatgaaaagttcgctacccccagcttcaactcgtattca
agcccctctggtgcccctcaggcgggctcccagaactacaatactgctgcaaagcccttt
ggatcccctgcacccaggcccgatgtggacgctgtcacacagcaaactagtcaactctcc
tttgccccgaagcctgcggcggtgccggctgcccctccccctccccctcccatgcagggc
caggggccagggttctactcagccaccccaccccctccccctcctgctcagacccagggg
ccagggttttactcagctgcccagaagtatgcggacaatgaggagaaaccaacatttgcc
cagcatcagtcacgctccttcaaattcctccaaggcatgatggacagtggacaagagcca
cctaaaaccctgcgaccttctcctggccaagtggttcggagtgtctcacccagcacaacc
cagaacaactttaactccaaaccccggcagttcaataccccacaaggaatgtattcagag
gaaagtaccaatagtgcgttaaagatggcaagggaccagccctctacacctaaggctccc
ccagcaccagctcaatcttcggcgcctaagccaggggtgtggactcccccagcagcccct
actgccaagcctttcacccccaatgttcagccccctgcccctgctgctccaggaggcccc
aaaatgggccctccaaggaacccaactggagtcaatgcagttagagccaagaagggtgaa
gcaactattttcaagagcggtgattcagtgccaggaatcacaagaattcccgtctgttct
tcctgtagcatctcaatcagagggccttttgtggtagctctgggtaagacctggtgccct
gaccactttgtctgtcagaacccgcggtgtggacagaaactgctggatattggtttcgta
gaagagggaggcttcttgtactgtgaaaaggactatgaacaatactttgcaccaacttgt
accaagtgtggaaaaccaattgttggggagtgtgttaacgctctgcagaagacctaccac
cctgtctgcttcatctgctaccagtgtaagcagccaatcggcggtaaccagttccacttg
gaggatggcaacccgtactgtgaaaatgactggaggcagatgttccagaccatgtgcaag
gggtgcgacttccccatcgagcccggggaccactgggtggaggccatgggcaacaacttc
cactcagaatgtttcaactgctcgacctgtggtgttaatctagaaggtcaaccattcttt
gctaaaggcggcaaaccctactgcaagaaacacacccgataa
DBGET
integrated database retrieval system
