KEGG   Magallana gigas (Pacific oyster): 105335780
Entry
105335780         CDS       T03920                                 
Name
(RefSeq) splicing factor U2AF 50 kDa subunit
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
crg  Magallana gigas (Pacific oyster)
Pathway
crg03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:crg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    105335780
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:crg03041]
    105335780
Spliceosome [BR:crg03041]
 Complex A
  U2 snRNP components
   U2 related factors
    105335780
 Complex B
    105335780
SSDB
Motif
Pfam: RRM_1 RRM_occluded RRM_7 Transformer RSRP RRM_9
Other DBs
NCBI-GeneID: 105335780
NCBI-ProteinID: XP_011438167
UniProt: A0A8W8MGE3
LinkDB
Position
7:49513091..49519274
AA seq 450 aa
MAMMSDNDFQDFERQLAENRSEIEKDKGGGGGGGGRKRSRSRSRGRRSRSREKKRSKSKE
KERKRRSRSRSRERGRKRKKPYKYWDVPPAGFEHISPMQYKAMQSAGQIPQAISVPNVAL
TNTTVPFAGSAISRQARRLYVGNIPFGVTEEAMMDFFNHQMKMTGLAQAEGSPVIAVQIN
LDKNFAFLEFRSVDETTQAMAFDGINFQGQSLKIRRPRDYQPLPGMAETPSVNVPGVVST
VVQDSPHKIFIGGLPNYLNEDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDPNV
TDQGCAGLNGMQLGDKKLIVQRASLGAKNSQVPVQLQIPGLNLNQGAGPPTEVLCLMNMI
VPEELEDEEEYEDILEDVKEECSKYGVVRSIEIPRPIKGVDVPGCGKIFVEFNSIIDCQK
AQQALTGRKFSNRVVVTSYYDPDKYHRREF
NT seq 1353 nt   +upstreamnt  +downstreamnt
atggccatgatgagcgacaacgatttccaagattttgagcgtcaactcgccgaaaatcga
tctgaaattgaaaaagacaaaggcggtggcggtggcggtggtggaaggaaacgctcaagg
tcacgctccaggggacgtaggtcacgcagtcgagagaagaaaagatctaaatcaaaggaa
aaagaaaggaaacggagatcaagaagtcgctctcgagaacgtggaaggaagaggaagaag
ccttacaagtactgggatgttcctcctgcagggtttgaacacatctctccaatgcagtat
aaagctatgcagagtgctggtcaaattccccaggctatatcggtgcctaatgttgccctg
accaacaccactgttcccttcgctggcagtgccatcagtagacaggccaggcgattgtac
gtgggcaacattccatttggagttactgaggaagccatgatggattttttcaatcatcag
atgaaaatgacagggttagctcaggcagagggaagtcctgtcattgctgtacagatcaat
ctagacaaaaactttgccttccttgagttccgttctgttgatgagacgacacaagccatg
gcttttgatggaatcaactttcaaggccagtccctcaaaataaggagacctcgggattac
cagcctctgccgggaatggccgagactccctcagtcaatgttccaggggtggtatccaca
gtggtacaagactcgccacacaaaatttttattggaggactgcctaactatctcaatgag
gatcaggtgaaggaactgttgacatcatttggaccgttgaaggcctttaacttggtgaag
gacagtgccactggcttatccaaaggttatgctttctgtgaatatgttgacccaaatgtc
actgaccagggatgtgcaggattaaatggaatgcagttaggagacaaaaagttgattgta
caaagggccagtttaggagcaaagaactcacaagtgccggttcagctccagatccctggt
ttgaacctgaaccagggagcaggtcctcccacagaggttctgtgtctgatgaacatgatt
gtcccagaggagctagaggacgaggaggagtatgaagatatcttggaagatgttaaagaa
gaatgttctaaatatggagttgtgcgtagtattgaaatcccgagacctataaagggtgta
gatgttccaggatgtgggaagattttcgttgagtttaattcaataatcgattgtcagaaa
gctcagcaggcactgacagggaggaagttctcgaatcgtgtggtggtgacctcatactac
gaccctgacaagtaccatcgaagagagttttaa

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