Magallana gigas (Pacific oyster): 105335841
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Entry
105335841 CDS
T03920
Name
(RefSeq) ubiquitin-ribosomal protein eL40 fusion protein
KO
K02927
ubiquitin-large subunit ribosomal protein L40e
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg03010
Ribosome
crg04120
Ubiquitin mediated proteolysis
crg04137
Mitophagy - animal
crg04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
105335841
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
105335841
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
105335841
04137 Mitophagy - animal
105335841
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
crg03011
]
105335841
04121 Ubiquitin system [BR:
crg04121
]
105335841
Ribosome [BR:
crg03011
]
Ribosomal proteins
Eukaryotes
Large subunit
105335841
Archaea
105335841
Ubiquitin system [BR:
crg04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
105335841
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_L40e
Rad60-SLD
Ubiquitin_2
DUF2604
Rad60-SLD_2
TBK1_ULD
Ubiquitin_5
Plexin_RBD
OTU1_UBXL
Dsc3_N
UBL_UBAC1
Motif
Other DBs
NCBI-GeneID:
105335841
NCBI-ProteinID:
XP_011438258
LinkDB
All DBs
Position
2:42530591..42533644
Genome browser
AA seq
139 aa
AA seq
DB search
MSFNFAESCTVMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQ
LEDGRTLSDYNIQKESTLHLVLRLRGGIIEPSLRILASKYNCDKMICRKCYARLHPRATN
CRKRKCGHTNNIRPKKKLK
NT seq
420 nt
NT seq
+upstream
nt +downstream
nt
atgagttttaattttgcagaatcttgcaccgtcatgcagatctttgtaaagacattgacg
ggtaaaaccatcacccttgaggtggaaccctctgacactattgaaaatgtcaaggcaaag
attcaggacaaggaaggaattcccccagatcagcagagattgatttttgctggtaaacag
ttagaggatggccgtaccctctctgactacaacatccagaaagagtccactcttcacttg
gtgctgaggttgagaggtggcatcattgagccaagtttgaggattttggcttcaaagtac
aactgtgacaagatgatttgcagaaagtgctatgcacgtcttcacccaagagcaaccaac
tgtcgcaagaggaaatgtggacacaccaacaacatccgacccaagaagaagctgaagtaa
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